T(co)F Overview
T(co)F: SNAI2
Species: Homo sapiens
Knock-Method: shRNA
T(co)F Class: C2H2 zinc finger factors
T(co)F Superclass: Zinc-coordinating DNA-binding domains
Biosample Name: Primary human keratinocytes
Tissue Type: Skin
Biosample Type: Primary cell
# of Control: 2
# of Treat: 2
Data Source: GEO
Profile ID: GSE55269
Platform: GPL570
Pubmed ID: 25793155

SNAI2- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of SNAI2
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of SNAI2
Upstream Pathway Annotation of SNAI2
T(co)F Pathway Name Source Gene Number
SNAI2 Hs_miR-509-3p_alteration_of_YAP1-ECM_axis_WP3967_91491 WikiPathways 14
SNAI2 Hs_Kit_receptor_signaling_pathway_WP304_78799 WikiPathways 46
SNAI2 Signaling events mediated by Stem cell factor receptor (c-Kit) PID 53
SNAI2 Adherens junction KEGG 70
SNAI2 Regulation of nuclear beta catenin signaling and target gene transcription PID 80
SNAI2 Direct p53 effectors PID 141
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of SNAI2
T(co)F Expression in Human Normal Tissues (GTEx) T(co)F Expression in Cancer Cell Lines (CCLE)
T(co)F Expression in Human Cancers (TCGA) T(co)F Expression in Encode Cell Lines