T(co)F Overview
T(co)F: GTF2F1
Species: Homo sapiens
Knock-Method: shRNA
T(co)F Class: Others
T(co)F Superclass: ENCODE_TcoF
Biosample Name: HepG2
Tissue Type: Liver
Biosample Type: Cell line
# of Control: 2
# of Treat: 2
Data Source: ENCODE
Profile ID: ENCSR295XKC
Platform: -
Pubmed ID: -

GTF2F1- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of GTF2F1
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of GTF2F1
Upstream Pathway Annotation of GTF2F1
T(co)F Pathway Name Source Gene Number
GTF2F1 Signaling by FGFR2 IIIa TM Reactome 19
GTF2F1 Abortive elongation of HIV-1 transcript in the absence of Tat Reactome 23
GTF2F1 FGFR2 alternative splicing Reactome 27
GTF2F1 RNA Pol II CTD phosphorylation and interaction with CE Reactome 27
GTF2F1 General transcription regulation PANTHER 28
GTF2F1 mRNA Capping Reactome 29
GTF2F1 Pausing and recovery of Tat-mediated HIV elongation Reactome 30
GTF2F1 Tat-mediated HIV elongation arrest and recovery Reactome 30
GTF2F1 Elongation arrest and recovery Reactome 32
GTF2F1 HIV elongation arrest and recovery Reactome 32
GTF2F1 Pausing and recovery of HIV elongation Reactome 32
GTF2F1 Formation of the Early Elongation Complex Reactome 33
GTF2F1 Formation of the HIV-1 Early Elongation Complex Reactome 33
GTF2F1 Processing of Capped Intron-Containing Pre-mRNA Reactome 37
GTF2F1 Tat-mediated elongation of the HIV-1 transcript Reactome 40
GTF2F1 Formation of HIV-1 elongation complex containing HIV-1 Tat Reactome 42
GTF2F1 RNA Polymerase II Transcription Elongation Reactome 42
GTF2F1 Transcription regulation by bZIP transcription factor PANTHER 42
GTF2F1 Viral Messenger RNA Synthesis Reactome 43
GTF2F1 Formation of HIV elongation complex in the absence of HIV Tat Reactome 44
GTF2F1 Formation of RNA Pol II elongation complex Reactome 44
GTF2F1 HIV Transcription Initiation Reactome 44
GTF2F1 RNA Polymerase II HIV Promoter Escape Reactome 44
GTF2F1 RNA Polymerase II Promoter Escape Reactome 44
GTF2F1 RNA Polymerase II Transcription Initiation And Promoter Clearance Reactome 44
GTF2F1 RNA Polymerase II Transcription Initiation Reactome 44
GTF2F1 RNA Polymerase II Transcription Pre-Initiation And Promoter Opening Reactome 44
GTF2F1 Transcription of the HIV genome Reactome 44
GTF2F1 U12 Dependent Splicing Reactome 50
GTF2F1 TP53 Regulates Transcription of DNA Repair Genes Reactome 61
GTF2F1 RNA Polymerase II Pre-transcription Events Reactome 64
GTF2F1 RNA polymerase II transcribes snRNA genes Reactome 70
GTF2F1 pre-mRNA splicing Reactome 135
GTF2F1 AndrogenReceptor NetPath 167
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of GTF2F1
T(co)F Expression in Human Normal Tissues (GTEx) T(co)F Expression in Cancer Cell Lines (CCLE)
T(co)F Expression in Human Cancers (TCGA) T(co)F Expression in Encode Cell Lines