T(co)F Overview
T(co)F: BHLHE40
Species: Homo sapiens
Knock-Method: shRNA
T(co)F Class: Others
T(co)F Superclass: TcoF-DB_TF
Biosample Name: HeLaS3
Tissue Type: Cervix
Biosample Type: Cell line
# of Control: 2
# of Treat: 2
Data Source: GEO
Profile ID: GSE137850
Platform: GPL20795
Pubmed ID: 32885250

BHLHE40- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of BHLHE40
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of BHLHE40
Upstream Pathway Annotation of BHLHE40
T(co)F Pathway Name Source Gene Number
BHLHE40 Circadian rhythm pathway PID 17
BHLHE40 Circadian rhythm - mammal KEGG 19
BHLHE40 Hs_Heart_Development_WP1591_90186 WikiPathways 28
BHLHE40 HIF-2-alpha transcription factor network PID 34
BHLHE40 BMAL1:CLOCK,NPAS2 activates circadian gene expression Reactome 42
BHLHE40 Fanconi anemia pathway PID 48
BHLHE40 HIF-1-alpha transcription factor network PID 67
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of BHLHE40
T(co)F Expression in Human Normal Tissues (GTEx) T(co)F Expression in Cancer Cell Lines (CCLE)
T(co)F Expression in Human Cancers (TCGA) T(co)F Expression in Encode Cell Lines