T(co)F Overview
T(co)F: Sall4
Species: Mus musculus
Knock-Method: shRNA
T(co)F Class: C2H2 zinc finger factors
T(co)F Superclass: Zinc-coordinating DNA-binding domains
Biosample Name: ES cells
Tissue Type: Embryo
Biosample Type: Cell line
# of Control: 2
# of Treat: 2
Data Source: GEO
Profile ID: GSE14219
Platform: GPL1261
Pubmed ID: 19350679

Sall4- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of Sall4
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of Sall4
Upstream Pathway Annotation of Sall4
T(co)F Pathway Name Source Gene Number
Sall4 PTEN_REGULATION REACTOME 113
Sall4 REGULATION_OF_PTEN_GENE_TRANSCRIPTION REACTOME 42
Sall4 INTRACELLULAR_SIGNALING_BY_SECOND_MESSENGERS REACTOME 260
Sall4 MECHANISMS_ASSOCIATED_WITH_PLURIPOTENCY WP 290
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of Sall4
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)