KnockTF-Search

T(co)F Overview

T(co)F:	Snai1
Species:	Mus musculus
Knock-Method:	knockout
T(co)F Class:	C2H2 zinc finger factors
T(co)F Superclass:	Zinc-coordinating DNA-binding domains
Biosample Name:	Embryoid body
Tissue Type:	Embryo
Biosample Type:	Tissue
# of Control:	1
# of Treat:	1
Data Source:	GEO
Profile ID:	GSE53106
Platform:	GPL1261
Pubmed ID:	24401905

T(co)F

up-regulated gene

down-regulated gene

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:

Target Gene Information of Snai1

Showing 1 to 15 of 16,571 entries

Search:

Target Gene	T(co)F	Mean Expr. of Control	Mean Expr. of Treat	Fold Change	Log2FC	Rank	P-value	Corrected _P	Promoter _T(co)F	SE_T(co)F	TE_T(co)F

Target Gene	T(co)F	Mean Expr. of Control	Mean Expr. of Treat	Fold Change	Log2FC	Rank	P-value	Corrected _P	Promoter _T(co)F	SE_T(co)F	TE_T(co)F
Lum	Snai1	11.652	5.28881	0.0121474	-6.3632	1	-	-	103 Atrx	524 Alx3	541 Aire
Postn	Snai1	11.8545	5.91033	0.0162412	-5.9442	2	-	-	108 Ascl1	628 Snai1	619 Snai1
Col3a1	Snai1	11.5856	5.89314	0.0193377	-5.69244	3	-	-	148 Aff3	730 Snai1	716 Adnp
Hoxc8	Snai1	8.68205	3.98467	0.0385431	-4.69738	4	-	-	168 Aebp2	704 Snai1	714 Snai1
Pf4	Snai1	9.87014	5.18039	0.0387475	-4.68975	5	-	-	154 Snai1	484 Snai1	460 Snai1
Nfe2	Snai1	8.91808	4.38035	0.0430534	-4.53773	6	-	-	220 Arid3a	778 Snai1	732 Snai1
Hba-x	Snai1	13.5112	9.12966	0.0479749	-4.38158	7	-	-	80 Aebp2	802 Snai1	765 Snai1
Col5a2	Snai1	8.92059	4.56613	0.0488853	-4.35445	8	-	-	181 Snai1	745 Snai1	726 Snai1
Upk3b	Snai1	7.94049	3.63461	0.0505592	-4.30588	9	-	-	125 Ascl1	539 Snai1	513 Snai1
Gypa	Snai1	7.70598	3.41856	0.0512104	-4.28742	10	-	-	238 Aebp2	529 Aebp2	680 Snai1
Bnc1	Snai1	9.35624	5.07352	0.0513776	-4.28272	11	-	-	228 Aebp2	767 Snai1	680 Aebp2
S100g	Snai1	11.1016	6.82671	0.0516579	-4.27487	12	-	-	81 Aire	0 Na	598 Snai1
Lgals2	Snai1	9.78657	5.54086	0.0527127	-4.24571	13	-	-	166 Arnt2	776 Snai1	760 Snai1
Tff3	Snai1	9.57625	5.47056	0.0580851	-4.10569	14	-	-	91 Ascl1	763 Snai1	707 Snai1
Alas2	Snai1	9.37292	5.27545	0.0584166	-4.09748	15	-	-	69 Ascl2	420 Snai1	598 Snai1

Show entries

#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.

Function Analysis of Downstream Target Genes of Snai1

Upregulated.Pathways Downregulated.Pathways Global.Plots

Upstream Pathway Annotation of Snai1

From 1 to 3 results, Total 3 items

Search:

T(co)F	Pathway Name	Source	Gene Number
Snai1	MTA3_PATHWAY	BIOCARTA	19
Snai1	NEURAL_CREST_DIFFERENTIATION	WP	99
Snai1	COMPREHENSIVE_IL17A_SIGNALING	WP	101

Show entries

Target Gene Expression Analysis

Expression Atlas of Snai1