T(co)F Overview
T(co)F: Snai1
Species: Mus musculus
Knock-Method: knockout
T(co)F Class: C2H2 zinc finger factors
T(co)F Superclass: Zinc-coordinating DNA-binding domains
Biosample Name: Small intestinal organoid
Tissue Type: Intestine
Biosample Type: Tissue
# of Control: 3
# of Treat: 3
Data Source: GEO
Profile ID: GSE65005
Platform: GPL6887
Pubmed ID: 27054090

Snai1- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of Snai1
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of Snai1
Upstream Pathway Annotation of Snai1
T(co)F Pathway Name Source Gene Number
Snai1 MTA3_PATHWAY BIOCARTA 19
Snai1 NEURAL_CREST_DIFFERENTIATION WP 99
Snai1 COMPREHENSIVE_IL17A_SIGNALING WP 101
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of Snai1
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)