T(co)F Overview
T(co)F: Spdef
Species: Mus musculus
Knock-Method: knockout
T(co)F Class: Tryptophan cluster factors
T(co)F Superclass: Helix-turn-helix domains
Biosample Name: Colon
Tissue Type: Colon
Biosample Type: Tissue
# of Control: 2
# of Treat: 2
Data Source: GEO
Profile ID: GSE20299
Platform: GPL8759
Pubmed ID: 20801882

Spdef- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of Spdef
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of Spdef
Upstream Pathway Annotation of Spdef
T(co)F Pathway Name Source Gene Number
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of Spdef
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)