cell_id Species cell_source cell_type cell_name cell_state Sample_02_1589 Human NCBI GEO/SRA Cell line Breast MCF7 DMSO, ethanol Sample_02_1590 Human NCBI GEO/SRA Cell line Breast MCF7 DMSO, E2 Sample_02_1591 Human NCBI GEO/SRA Cell line Breast MCF7 dTAG, E2 Sample_02_1599 Human NCBI GEO/SRA Cell line Breast MCF7 Tet1 knockdown Sample_02_1600 Human NCBI GEO/SRA Cell line Breast MCF7 Tet2 knockdown Sample_02_1601 Human NCBI GEO/SRA Cell line Breast MCF7 Control cells Sample_02_1602 Human NCBI GEO/SRA Cell line Breast SKBR3_UT_K27_rep1 Sample_02_1603 Human NCBI GEO/SRA Cell line Breast SKBR3_TWEAK_K27_rep1 Sample_02_1604 Human NCBI GEO/SRA Cell line Breast MDA-MB-453_UT_K27_rep1 Sample_02_1605 Human NCBI GEO/SRA Cell line Breast MDA-MB-453_TWEAK_K27_rep1 Sample_02_1606 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 UT_K27_rep1 Sample_02_1607 Human NCBI GEO/SRA Cell line Breast MDA-MB-231_TWEAK_K27_rep1 Sample_02_1608 Human NCBI GEO/SRA Cell line Breast Hs578T_UT_K27_rep1 Sample_02_1609 Human NCBI GEO/SRA Cell line Breast Hs578T_TWEAK_K27_rep1 Sample_02_1610 Human NCBI GEO/SRA Cell line Breast MCF7_UT_K27_rep1 Sample_02_1611 Human NCBI GEO/SRA Cell line Breast MCF7_TWEAK1_K27_rep1 Sample_02_1612 Human NCBI GEO/SRA Cell line Breast CAMA1_UT_K27_rep1 Sample_02_1613 Human NCBI GEO/SRA Cell line Breast CAMA1_TWEAK1_K27_rep1 Sample_02_1719 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 EV No antibody Sample_02_1720 Human NCBI GEO/SRA Cell line Breast SUM185_wt_no_dox_short_ChIP_1 Sample_02_1721 Human NCBI GEO/SRA Cell line Breast SUM185_wt_dox_short_ChIP_1 Sample_02_1722 Human NCBI GEO/SRA Cell line Breast SUM185_dH3_no_dox_short_ChIP_1 Sample_02_1723 Human NCBI GEO/SRA Cell line Breast SUM185_dH3_dox_short_ChIP_1 Sample_02_1724 Human NCBI GEO/SRA Cell line Breast SUM185_wt_no_dox_long_ChIP_1 Sample_02_1725 Human NCBI GEO/SRA Cell line Breast SUM185_wt_dox_long_ChIP_1 Sample_02_1726 Human NCBI GEO/SRA Cell line Breast SUM185_dH3_no_dox_long_ChIP_1 Sample_02_1727 Human NCBI GEO/SRA Cell line Breast SUM185_dH3_dox_long_ChIP_1 Sample_02_1728 Human NCBI GEO/SRA Cell line Breast HCC3153_wt_no_dox_short_ChIP_1 Sample_02_1729 Human NCBI GEO/SRA Cell line Breast HCC3153_dH3_no_dox_short_ChIP_1 Sample_02_1730 Human NCBI GEO/SRA Cell line Breast HCC3153_dH3_dox_short_ChIP_1 Sample_02_1731 Human NCBI GEO/SRA Cell line Breast HCC3153_wt_no_dox_long_ChIP_1 Sample_02_1732 Human NCBI GEO/SRA Cell line Breast HCC3153_wt_dox_long_ChIP_1 Sample_02_1733 Human NCBI GEO/SRA Cell line Breast HCC3153_dH3_no_dox_long_ChIP_1 Sample_02_1734 Human NCBI GEO/SRA Cell line Breast HCC3153_dH3_dox_long_ChIP_1 Sample_02_1749 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 control Sample_02_1750 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 ARID1A knockout Sample_02_1776 Human NCBI GEO/SRA Cell line Breast MDA-MB-231,control Sample_02_1777 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 PML knockdown Sample_02_1799 Human NCBI GEO/SRA Cell line Breast MCF-7 Veh UNTR Sample_02_1800 Human NCBI GEO/SRA Cell line Breast MCF-7 MG132 4H MG4H Sample_02_1801 Human NCBI GEO/SRA Cell line Breast MCF-7 MG132 4H MG24H Sample_02_1837 Human NCBI GEO/SRA Cell line Breast MCF7 ser +Serine media for 24h Sample_02_1838 Human NCBI GEO/SRA Cell line Breast MCF7 noser -Serine media for 24h Sample_02_1839 Human NCBI GEO/SRA Cell line Breast MCF7 noserGTA -Serine+GTA media for 24h Sample_02_1840 Human NCBI GEO/SRA Cell line Breast MCF10A_shANCO1 Sample_02_1841 Human NCBI GEO/SRA Cell line Breast MCF10A_shCTRL Sample_02_1842 Human NCBI GEO/SRA Cell line Breast MCFDCIS_shANCO1 Sample_02_1843 Human NCBI GEO/SRA Cell line Breast MCFDCIS_shCTRL Sample_02_1977 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 treated with GFP-sgRNA as a control Sample_02_1978 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 treated with TRIM11-sgRNA1 to knockdown TRIM11 Sample_02_1979 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 treated with TRIM11-sgRNA2 to knockdown TRIM11 Sample_02_1980 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 treated with KDM5C-sgRNA1 to knockdown KDM5C Sample_02_1981 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 treated with KDM5C-sgRNA2 to knockdown KDM5C Sample_02_2006 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 sgNT1, biological replicate1 Sample_02_2007 Human NCBI GEO/SRA Cell line Breast MDA-MB-231 sgMLL3, biological replicate1 Sample_02_2012 Human NCBI GEO/SRA Cell line Breast HCC1599 Sample_02_2201 Human NCBI GEO/SRA Cell line Breast BT549 Sample_02_2202 Human NCBI GEO/SRA Cell line Breast CAL851 Sample_02_2203 Human NCBI GEO/SRA Cell line Breast DU4475 Sample_02_2204 Human NCBI GEO/SRA Cell line Breast EMG3 Sample_02_2205 Human NCBI GEO/SRA Cell line Breast FCIBC02 Sample_02_2206 Human NCBI GEO/SRA Cell line Breast HCC1143 Sample_02_2207 Human NCBI GEO/SRA Cell line Breast HCC1187 Sample_02_2208 Human NCBI GEO/SRA Cell line Breast HCC1395 Sample_02_2209 Human NCBI GEO/SRA Cell line Breast HCC1806 Sample_02_2210 Human NCBI GEO/SRA Cell line Breast HCC2185 Sample_02_2211 Human NCBI GEO/SRA Cell line Breast HCC3153 Sample_02_2212 Human NCBI GEO/SRA Cell line Breast HCC70 Sample_02_2213 Human NCBI GEO/SRA Cell line Breast Hs578 Sample_02_2214 Human NCBI GEO/SRA Cell line Breast MDAMB436 Sample_02_2215 Human NCBI GEO/SRA Cell line Breast MDAMB468 Sample_02_2216 Human NCBI GEO/SRA Cell line Breast MFM223 Sample_02_2217 Human NCBI GEO/SRA Cell line Breast PMC42 Sample_02_2218 Human NCBI GEO/SRA Cell line Breast SUM102 Sample_02_2219 Human NCBI GEO/SRA Cell line Breast SUM1315 Sample_02_2220 Human NCBI GEO/SRA Cell line Breast SUM149 Sample_02_2221 Human NCBI GEO/SRA Cell line Breast SUM185 Sample_02_2222 Human NCBI GEO/SRA Cell line Breast SUM229 Sample_02_2223 Human NCBI GEO/SRA Cell line Breast UACC3199 Sample_02_2224 Human NCBI GEO/SRA Cell line Breast 4272-TG5 Sample_02_2225 Human NCBI GEO/SRA Cell line Breast 5998-TG5 Sample_02_2226 Human NCBI GEO/SRA Cell line Breast BCM-3107 Sample_02_2227 Human NCBI GEO/SRA Cell line Breast HCI-009 Sample_02_2228 Human NCBI GEO/SRA Cell line Breast T272X Sample_02_2229 Human NCBI GEO/SRA Cell line Breast BCM-2665 Sample_02_2230 Human NCBI GEO/SRA Cell line Breast 4195-TG5 Sample_02_2231 Human NCBI GEO/SRA Cell line Breast HCI-001 Sample_02_2232 Human NCBI GEO/SRA Cell line Breast 4013-TG6 Sample_02_2233 Human NCBI GEO/SRA Cell line Breast 2147-TG5 Sample_02_2234 Human NCBI GEO/SRA Cell line Breast HCI-002 Sample_02_2235 Human NCBI GEO/SRA Cell line Breast IDC50X Sample_02_2280 Human NCBI GEO/SRA Cell line Breast CT_1607 Sample_02_2281 Human NCBI GEO/SRA Cell line Breast CTE_1608 Sample_02_2282 Human NCBI GEO/SRA Cell line Breast MA_1609 Sample_02_2283 Human NCBI GEO/SRA Cell line Breast MAE_1610 Sample_02_2361 Human NCBI GEO/SRA Cell line Breast MCF10A Sample_02_2362 Human NCBI GEO/SRA Cell line Breast MCF10AT1 Sample_02_2442 Human NCBI GEO/SRA Cell line Breast MDA::ER::pCDNA 10-8M Estradiol (Sigma) Sample_02_2443 Human NCBI GEO/SRA Cell line Breast MDA::ER::FOXA1 10-8M Estradiol (Sigma) Sample_02_2446 Human NCBI GEO/SRA Cell line Breast MWC208_SUM159 CD104-low Sample_02_2447 Human NCBI GEO/SRA Cell line Breast MWC210_SUM159 CD104-high Sample_02_2448 Human NCBI GEO/SRA Cell line Breast MWC226 SUM159 CD104-low Sample_02_2449 Human NCBI GEO/SRA Cell line Breast MWC228 SUM159 CD104-high Sample_02_2450 Human NCBI GEO/SRA Cell line Breast WB1_NT [SUM159(Non-targeting control)] Sample_02_2451 Human NCBI GEO/SRA Cell line Breast WB3_p63_KO [SUM159(p63 KO)] Sample_02_2452 Human NCBI GEO/SRA Cell line Breast WB5_p73_KO [SUM159(p73 KO)] Sample_02_2453 Human NCBI GEO/SRA Cell line Breast WB7_dKO [SUM159(p63 and p73 KO)] Sample_02_2454 Human NCBI GEO/SRA Cell line Breast WB13_dKO-EV [SUM159(p63 and p73 KO) with exogenous Empty vector] Sample_02_2455 Human NCBI GEO/SRA Cell line Breast WB15_dKO-p63 [SUM159(p63 and p73 KO) with exogenous p63] Sample_02_2456 Human NCBI GEO/SRA Cell line Breast WB17_dKO-p73 [SUM159(p63 and p73 KO) with exogenous p73] Sample_02_2457 Human NCBI GEO/SRA Cell line Breast WB19_dKO-dual [SUM159(p63 and p73 KO) with exogenous p63/p73] Sample_02_2496 Human NCBI GEO/SRA Cell line Breast MCF7-WM-E2 Estrogen Sample_02_2497 Human NCBI GEO/SRA Cell line Breast MDA134-WM-E2-Estrogen Sample_02_2498 Human NCBI GEO/SRA Cell line Breast SUM44-WM-E2-Estrogen Sample_02_2499 Human NCBI GEO/SRA Cell line Breast T47D-WM-E2-Estrogen Sample_02_2545 Human NCBI GEO/SRA Cell line Breast T47D_LTED9M Sample_02_2546 Human NCBI GEO/SRA Cell line Breast T47D_FM_H3K27ac Sample_02_2562 Human NCBI GEO/SRA Cell line Breast MDA-MB-468_1 Sample_02_2651 Human NCBI GEO/SRA Cell line Breast ChIP-seq MCF-7 DMSO Sample_02_2652 Human NCBI GEO/SRA Cell line Breast ChIP-seq MCF-7 50nM CPI-1612 Sample_02_2659 Human NCBI GEO/SRA Cell line Breast MCF7 Sample_02_2667 Human NCBI GEO/SRA Cell line Breast ChIP-MCF7 Sample_02_2699 Human NCBI GEO/SRA Cell line Breast MCF10a_in_serum Sample_02_2700 Human NCBI GEO/SRA Cell line Breast MCF10a_serumWD_24h Sample_02_2701 Human NCBI GEO/SRA Cell line Breast MCF10a_serumWD_back1h Sample_02_2702 Human NCBI GEO/SRA Cell line Breast MCF10a_serumWD_back30min Sample_02_2703 Human NCBI GEO/SRA Cell line Breast MCF10a_serumWD_back3h Sample_02_2704 Human NCBI GEO/SRA Cell line Breast MCF10a_serumWD_back6h Sample_02_2780 Human NCBI GEO/SRA Primary cell Breast HMEC_rep1 Sample_02_2781 Human NCBI GEO/SRA Cell line Breast T47D_rep1 Sample_02_2782 Human NCBI GEO/SRA Cell line Breast ZR7530_rep1 Sample_02_2783 Human NCBI GEO/SRA Cell line Breast HCC1954_rep1 Sample_02_2784 Human NCBI GEO/SRA Cell line Breast HCC70_rep1 Sample_02_2785 Human NCBI GEO/SRA Cell line Breast BT549_rep1 Sample_02_2852 Human NCBI GEO/SRA Cell line Breast WT_1 Sample_02_2853 Human NCBI GEO/SRA Cell line Breast KO_1 Sample_02_2866 Human NCBI GEO/SRA Cell line Breast NEG Acute DMSO Sample_02_2867 Human NCBI GEO/SRA Cell line Breast NEG Acute Tram Sample_02_2868 Human NCBI GEO/SRA Cell line Breast NEG Chronic D0 Sample_02_2869 Human NCBI GEO/SRA Cell line Breast NEG Chronic D14 Sample_02_2870 Human NCBI GEO/SRA Cell line Breast POS Acute DMSO Sample_02_2871 Human NCBI GEO/SRA Cell line Breast POS Chronic D0 Sample_02_2872 Human NCBI GEO/SRA Cell line Breast POS Chronic D14 Sample_02_2873 Human NCBI GEO/SRA Cell line Breast POSR1 Sample_02_2874 Human NCBI GEO/SRA Cell line Breast POSR2 Sample_02_2985 Human NCBI GEO/SRA Cell line Breast con_1 Sample_02_2986 Human NCBI GEO/SRA Cell line Breast SAHA+sonidedgib_1 Sample_02_2987 Human NCBI GEO/SRA Cell line Breast SAHA_1 Sample_02_3084 Human NCBI GEO/SRA Cell line Breast HCC3153_wt_dox_short_ChIP_1 Sample_02_3120 Human NCBI GEO/SRA Cell line Breast SUM-229PE Triple-Negative Breast Cancer POS Acute Tram Sample_02_3127 Human NCBI GEO/SRA cell line Breast MDA-MB-453 DHT Sample_02_3128 Human NCBI GEO/SRA cell line Breast MDA-MB-453 Veh Consensus Sample_02_3129 Human NCBI GEO/SRA cell line Breast MDA-MB-453 DHT Consensus Sample_02_3130 Human NCBI GEO/SRA cell line Breast MFM-223 Veh Consensus Sample_02_3131 Human NCBI GEO/SRA cell line Breast MFM-223 DHT Consensus Sample_02_3136 Human NCBI GEO/SRA cell line Breast MCF10CA1a Sample_02_3137 Human NCBI GEO/SRA cell line Breast MCF10DCIS Sample_02_3138 Human NCBI GEO/SRA cell line Breast SUM159PT_KOD1 Sample_02_3139 Human NCBI GEO/SRA cell line Breast SUM159PT_KOS1 Sample_02_3140 Human NCBI GEO/SRA cell line Breast SUM159PT_WT1