| Sample ID: | Sample_1315 |
| Biosample name: | GM12878 |
| Biosample type: | Cell Line |
| Tissue type: | Blood |
| Cancer type: | Normal |
| Region number: | 403 |
| Length: | 257.957 kb |
| GEO/SRA ID: | SRR891273 |
| Mean insert size: | 286.799 |
| Standard deviation: | 245.628 |
| TSS enrichment score: | 2.23270 |
| FRiP: | 0.00140 |
| Diasgnostic plot | |
 |
|
| Plot A: | - - | Note A: | - - | Plot B: | - - |
| Note B: | - - |
| Read mapping: | bowtie2(v2.2.5) -p 10 -X 2000 -x -S |
| Duplicates Removing: | picard MarkDuplicates REMOVE_DUPLICATES=true ASSUME_SORTED=true |
| Peak calling: | macs2(2.1.2) --broad--SPMR --nomodel --extsize 200 -q 0.01 |
| Trimming the adapter: | trim_galore --phred33 --stringency 3 --length 20 |
黑ICP备16009434号-1 | Li C Lab
