| Sample ID: | Sample_0541 |
| Biosample name: | MCF7 |
| Biosample type: | Cell Line |
| Tissue type: | Mammary Gland |
| Cancer type: | Breast cancer |
| Region number: | 6 |
| Length: | 1.715 kb |
| GEO/SRA ID: | SRR5926789 |
| Mean insert size: | -- |
| Standard deviation: | -- |
| TSS enrichment score: | 1.15522 |
| FRiP: | 0.00138 |
| Diasgnostic plot | |
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| Plot A: | - - | Note A: | - - | Plot B: | - - |
| Note B: | - - |
| Read mapping: | bowtie2(v2.2.5) -p 10 -X 2000 -x -S |
| Duplicates Removing: | picard MarkDuplicates REMOVE_DUPLICATES=true ASSUME_SORTED=true |
| Peak calling: | macs2(2.1.2) --broad--SPMR --nomodel --extsize 200 -q 0.01 |
| Trimming the adapter: | trim_galore --phred33 --stringency 3 --length 20 |
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