Gene Overview
Target Gene: APOBEC3F
NCBI Official Symbol: APOBEC3F
Entrez ID: 200316
Ensembl ID: ENSG00000128394
Gene Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3F
Strand: +
Gene Locus: 22q13.1
External Links:

APOBEC3F Significantly Regulated by These T(co)Fs

T(co)Fs that Activate APOBEC3F   
T(co)Fs that Repress APOBEC3F
The Intensity of the Gene Regulated by T(co)Fs:
APOBEC3F-T(co)F Pairs
Target
Gene		 T(co)F Knock
-Method		 Tissue Type Biosample
Name		 Fold
Change		 Log2FC P-value Corrected
_P		 Dataset ID
APOBEC3F ZIC2 siRNA Pancreas PANC1 2.56912 1.36127 - - DataSet_01_121
APOBEC3F FOXM1 siRNA Central_nervous_system U87 3.2203 1.6872 - - DataSet_01_122
APOBEC3F ELK1 siRNA Peripheral_blood CD4+ T cells 360.478 8.49377 0.01728 0.07484 DataSet_01_162
APOBEC3F JUN siRNA Peripheral_blood CD4+ T cells 367.375 8.52111 0.02186 0.11409 DataSet_01_164
APOBEC3F MAF siRNA Peripheral_blood CD4+ T cells 2.56334 1.35803 0.00016 0.00817 DataSet_01_165
APOBEC3F NFATC3 siRNA Peripheral_blood CD4+ T cells 413.29 8.69101 0.02802 0.16912 DataSet_01_166
APOBEC3F TCF4 siRNA Autonomic_ganglia SH-SY5Y 2.7135 1.44016 0.00707 0.07202 DataSet_01_185
APOBEC3F GABPA shRNA Prostate C4-2B 2140.06 11.0634 0.23848 0.43934 DataSet_01_190
APOBEC3F GABPA shRNA Prostate LNCaP 1604.47 10.6479 0.46252 0.7048 DataSet_01_191
APOBEC3F CREB1 shRNA Parotid_gland H3118 MEC 2.53037 1.33935 0.01539 0.21276 DataSet_01_194
APOBEC3F TP63 siRNA Immortalized_keratinocyte HaCaT RG 6.34146 2.66482 - - DataSet_01_196
APOBEC3F TP63 siRNA Head_and_neck SCC-1 1.63673 0.71082 - - DataSet_01_198
APOBEC3F HIC1 shRNA Mammary_gland HBL100 0.64805 -0.62583 - - DataSet_01_205
APOBEC3F LIN28A siRNA Embryo H9 1.68713 0.75457 0.00756 0.04188 DataSet_01_215
APOBEC3F ATM shRNA Mammary_gland MCF10A 1.66674 0.73703 5.6507e-07 1.55735e-05 DataSet_01_219
APOBEC3F SNAI2 shRNA Skin Primary human keratinocytes 0.5629 -0.82904 0.01588 0.06209 DataSet_01_225
APOBEC3F STAT5 shRNA Haematopoietic_and_lymphoid_tissue K562 1.57185 0.65246 0.00037 0.00358 DataSet_01_239
APOBEC3F POSTN shRNA Brain GSC272 2.13494 1.0942 0.10663 0.55452 DataSet_01_293
APOBEC3F TFAP4 siRNA Brain BE(2)-C 0.16805 -2.57303 0.30578 0.51625 DataSet_01_295
APOBEC3F PTEN shRNA Skin A431 1.76071 0.81616 0.00297 0.07137 DataSet_01_301
APOBEC3F ARNT siRNA Upper_aerodigestive_tract HSC3 0.00008 -13.6778 - - DataSet_01_315
APOBEC3F MYC siRNA Colon HCT116 2.05448 1.03878 5.3671e-08 7.61503e-07 DataSet_01_324
APOBEC3F HOXC6 siRNA Prostate LNCaP 12.2364 3.6131 0.05374 0.99927 DataSet_01_333
APOBEC3F SOX17 siRNA Umbilical_vein HUVEC 1.81412 0.85927 - - DataSet_01_360
APOBEC3F ATF4 siRNA Skin A375 0.645815 -0.630807 0.0804226299681208 0.775512819201899 DataSet_03_018
APOBEC3F GATA2 siRNA Lymph Lymphatic endothelial cells 1.55075 0.632966 0.000223946591258061 0.00133190267172799 DataSet_03_101
APOBEC3F GFP siRNA Mammary_gland BT-20 cells 0.6 -0.736966 0.0868702831141834 0.582206573414568 DataSet_03_111
APOBEC3F HIC1 CRISPR Prostate PC3 1.57072 0.651424 - - DataSet_03_118
APOBEC3F MEF2D siRNA Liver HuH7 0.587308 -0.767811 - - DataSet_03_163
APOBEC3F RELB siRNA Immortalized_keratinocyte HaCaT 0.317479 -1.65527 9.15606136523239e-08 3.86363457755818e-06 DataSet_03_227
APOBEC3F SOX11 siRNA Lung_fibroblast NHLF 1.5227 0.606632 0.196556845984694 0.566714688452427 DataSet_03_238
APOBEC3F SOX4 siRNA Haematopoietic_and_lymphoid_tissue ST1 2.77049 1.47014 - - DataSet_03_246
APOBEC3F SP1 siRNA Ovary OVSAYO 0.550747 -0.860538 0.00810064654035797 0.123104024907908 DataSet_03_251
APOBEC3F STAT3 CRISPR Embryo hESC 0.161418 -2.63113 0.0262291998931205 0.0928192964828179 DataSet_03_258
APOBEC3F TP53 siRNA Foreskin Neonatal foreskin keratinocytes 1.51319 0.597597 0.511082264232284 0.999791649573014 DataSet_03_278
APOBEC3F TP63 siRNA Foreskin Neonatal foreskin keratinocytes 2.34467 1.22938 0.124741424794895 0.74068467747383 DataSet_03_282
APOBEC3F SNAI2 shRNA Pancreas KLM1 0.576547 -0.79449 1.200785e-02 0.17398102 DataSet_03_307
APOBEC3F SKI CRISPR Blood HL60 3.90141 1.96399 1.697564e-04 0.036922024 DataSet_03_351
APOBEC3F ETV5 knockdown Colon HT29 0.330189 -1.59864 3.193600e-03 0.069509231 DataSet_03_353
APOBEC3F TET1 CRISPR Mammary_gland Hs578T 1.90517 0.929918 1.894396e-02 7.423093e-02 DataSet_03_355
APOBEC3F CREBBP CRISPR Brain U5-NPC 1.55867 0.640315 0.9157735306 0.9536827 DataSet_03_356
APOBEC3F PTPN14 CRISPR Brain U5-NPC 0.572727 -0.80408 8.344163e-02 0.30840104 DataSet_03_357
APOBEC3F RUNX1 shRNA Haematopoietic_and_lymphoid_tissue OCI-AML5 2.22942 1.15667 4.613587e-03 1.031383e-01 DataSet_03_359
APOBEC3F EP300 shRNA Mammary_gland MCF10AT 2 1 7.302519e-01 0.831628217 DataSet_03_364
APOBEC3F TP53 knockout Stomach SNU1 0.313739 -1.67236 0.3135769188 0.9301241 DataSet_03_365
APOBEC3F DNMT3A knockout Embryo_kidney HEK293T 1.9137 0.936366 - - DataSet_03_369
APOBEC3F ZFP36L1 siRNA Urinary_bladder J82 1.85019 0.887671 - - DataSet_03_371
APOBEC3F DDX5 shRNA Stomach HGC-27 2.05114 1.03642 - - DataSet_03_379
APOBEC3F NFKBIA shRNA Bone_marrow U2OS 0.627322 -0.672722 2.343442e-01 0.87005461 DataSet_03_389
APOBEC3F YY1 knockdown Liver HepG2 2.10443 1.07343 1.655509e-03 7.792572e-03 DataSet_03_390
APOBEC3F KDM5A CRISPR Lung GLC16 6.48299 2.69666 1.038690e-01 0.206276520 DataSet_03_392
APOBEC3F ASXL1 CRISPR Embryo iPSC 0.621764 -0.685561 0.3891313216 0.8395482 DataSet_03_394
APOBEC3F EHF shRNA Stomach MKN7 0.253318 -1.98098 - - DataSet_03_402
APOBEC3F CDK7 shRNA Bone_marrow D458 0.466667 -1.09954 5.041399e-01 0.72978611 DataSet_03_404
APOBEC3F STRAP knockout Nerve SK-N-AS 1.70362 0.768604 - - DataSet_03_409
APOBEC3F USP22 shRNA Liver HuH7 0.439014 -1.18766 - - DataSet_03_411
APOBEC3F ZKSCAN3 CRISPR Colon HCT116 0.424147 -1.23736 1.312757e-03 0.086321431 DataSet_03_415
APOBEC3F FOXK2 shRNA Ovary OVCAR-5 0.300469 -1.73471 1.020478e-02 0.09617284 DataSet_03_419
APOBEC3F MAEL CRISPR Liver Alexander cells 0.271605 -1.88042 - - DataSet_03_423
APOBEC3F STAT3 siRNA Peripheral_blood Monocyte-derived M-CSF macrophages 1.68982 0.756867 0.3367582639 1 DataSet_03_430
APOBEC3F USP7 shRNA Skin xenograft cells 0.432194 -1.21025 0.25724065 0.4348960 DataSet_03_431
APOBEC3F PLAG1 shRNA Cord_blood Lin-CD34+ HSPCs 0.507843 -0.977545 - - DataSet_03_432
APOBEC3F POU2AF1 CRISPR Haematopoietic_and_lymphoid_tissue OCI-Ly7 1.76679 0.821129 4.308575e-03 0.229010051 DataSet_03_434
APOBEC3F POU2AF1 CRISPR Lymph SUDHL4 9.84718 3.29971 4.233963e-03 0.024365687 DataSet_03_435
APOBEC3F SETDB1 shRNA Colon HCT116 0.617988 -0.694349 - - DataSet_03_440
APOBEC3F DAXX shRNA Mammary_gland MDA-MB-231 0.343994 -1.53954 2.303070e-02 0.16768791 DataSet_03_441
APOBEC3F CAMTA1 knockout Embryo_kidney HEK293T 1.77064 0.824273 3.118749e-02 0.15426169 DataSet_03_448
APOBEC3F CBX2 siRNA Mammary_gland MDA-MB-231 2.13374 1.09338 1.012734e-01 2.471463e-01 DataSet_03_450
APOBEC3F SREBF2 siRNA Umbilical_vein HUVEC 1.71504 0.77824 5.820779e-03 1.169592e-01 DataSet_03_457
APOBEC3F SOX9 knockout Liver HuH7 0.372093 -1.42626 2.626510e-02 8.674390e-02 DataSet_03_463
APOBEC3F SMARCA1 Cas13 Embryo_kidney HEK293T 0.257329 -1.95831 - - DataSet_03_466
APOBEC3F SMARCA1 CRISPR-Csm Embryo_kidney HEK293T 2.98371 1.57711 - - DataSet_03_467
Regulation Region
 
T(co)Fs that significantly regulate HOXC6 by the evidences of both expression and ChIP-seq/motif
Expression Atlas of APOBEC3F
Gene Expression in Human Normal Tissues (GTEx) Gene Expression in Cancer Cell Lines (CCLE)
Gene Expression in Human Cancers (TCGA) Gene Expression in Encode Cell Lines