Gene Overview
| Target Gene: | Kdm5d |
| NCBI Official Symbol: | Kdm5d |
| Entrez ID: | 20592 |
| Ensembl ID: | ENSMUSG00000056673 |
| Gene Full Name: | lysine (K)-specific demethylase 5D |
| Strand: | + |
| Gene Locus: | Y|Ypter |
| External Links: |
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Kdm5d Significantly Regulated by These T(co)Fs
T(co)Fs
that Activate Kdm5d
T(co)Fs
that Repress Kdm5d
The Intensity of the Gene Regulated by T(co)Fs:
Kdm5d-T(co)F Pairs
| Target Gene |
T(co)F | Knock -Method |
Tissue Type | Biosample Name |
Fold Change |
Log2FC | P-value | Corrected _P |
Dataset ID |
|---|---|---|---|---|---|---|---|---|---|
| Kdm5d | Adnp | knockout | Embryo | Whole embryonic body | 6.05094 | 2.59716 | 0.00137406158546902 | 0.218392007846558 | DataSet_11_001 |
| Kdm5d | Bcl6 | knockout | Bone_marrow | Myeloid cells | 11.3603 | 3.50593 | 1.18853534787735e-13 | 8.21713721677473e-10 | DataSet_11_015 |
| Kdm5d | Elf5 | knockout | Mammary_gland | Mammary gland | 0.403577 | -1.30908 | 0.0153144756852941 | 0.227860502287435 | DataSet_11_035 |
| Kdm5d | Foxp1 | knockout | Eye | Lens | 1.9375 | 0.954196 | - | - | DataSet_11_044 |
| Kdm5d | Gata5 | knockout | Lung | Left lung | 1.57917 | 0.659167 | 0.137258065323149 | 0.286669423598937 | DataSet_11_051 |
| Kdm5d | Gfi1 | knockout | Cord_Blood | T-cells | 0.529317 | -0.917796 | 0.400385541080091 | 0.754665647703656 | DataSet_11_053 |
| Kdm5d | Irf6 | knockout | Skin | Skin | 2.94622 | 1.55887 | 0.0532106129417564 | 0.289273935049363 | DataSet_11_062 |
| Kdm5d | Jarid2 | knockout | Pancreas | Embryonic pancreas | 0.126214 | -2.98606 | 0.0609933888146362 | 0.758178814946143 | DataSet_11_064 |
| Kdm5d | Lmx1b | knockout | Limb | Proximal limb | 0.643031 | -0.637039 | 0.148675299494148 | 0.625263481576243 | DataSet_11_071 |
| Kdm5d | Mbd1 | siRNA | Adipose_tissue | 3T3-L1 cells | 0.208333 | -2.26303 | - | - | DataSet_11_074 |
| Kdm5d | Mbd2 | knockout | Lymph | GFP+ BM leukemia cells | 7.07263 | 2.82225 | 2.74810594263442e-09 | 9.44155247020559e-07 | DataSet_11_076 |
| Kdm5d | Neurod1 | knockout | Eye | Pineal gland | 2.14528 | 1.10116 | 0.71247680072096 | 0.9983937273602 | DataSet_11_089 |
| Kdm5d | Nhlh2 | knockout | Eye | Retina | 0.561932 | -0.831533 | 0.200205319593568 | 0.523726874680013 | DataSet_11_092 |
| Kdm5d | Nr2f2 | knockout | Ovary | E14.5 Ovary | 1.56397 | 0.645209 | 0.0122542341211087 | 0.767375746273557 | DataSet_11_094 |
| Kdm5d | Otx2 | knockout | Eye | Retina | 0.568216 | -0.815488 | 0.315464667936407 | 0.999923528647439 | DataSet_11_097 |
| Kdm5d | Pax5 | knockout | Bone_marrow | B220+ cells | 0.438333 | -1.1899 | 0.102819144290715 | 0.497610643068593 | DataSet_11_100 |
| Kdm5d | Pbx1 | knockout | Bone_marrow | BM cells | 0.663629 | -0.59155 | 0.290549826696576 | 0.698547131808204 | DataSet_11_102 |
| Kdm5d | Plagl2 | knockout | Intestine | Small intestine | 0.56 | -0.836501 | 0.0973482266524885 | 0.364029006950227 | DataSet_11_104 |
| Kdm5d | Pparg | siRNA | Adipose_tissue | Preadipocytes | 2.02824 | 1.02023 | 0.29833791808012 | 0.961087314794121 | DataSet_11_105 |
| Kdm5d | Prox1 | knockout | Liver | Liver | 13.4461 | 3.74912 | - | - | DataSet_11_109 |
| Kdm5d | Rest | knockout | Brain | Brain | 1.63168 | 0.706357 | 0.104196663514928 | 1 | DataSet_11_113 |
| Kdm5d | Runx1 | knockout | Bone_marrow | KSL cells | 1.85059 | 0.887983 | 0.082135585599455 | 0.849094095028039 | DataSet_11_115 |
| Kdm5d | Runx1 | knockout | Lymph | ProB cells | 1.54833 | 0.630716 | 0.316721749450906 | 0.657884370317543 | DataSet_11_116 |
| Kdm5d | Shox2 | knockout | Muscle | Embryonic forelimb | 11.1314 | 3.47656 | 4.8703719396522e-06 | 0.0324626524350952 | DataSet_11_125 |
| Kdm5d | Smad1 | knockout | Lung | Lung left lobe | 0.57544 | -0.797262 | 0.0933290120154384 | 0.542998753027287 | DataSet_11_126 |
| Kdm5d | Smad4 | siRNA | Brain | bEnd3 | 0.0651107 | -3.94096 | - | - | DataSet_11_127 |
| Kdm5d | Sox11 | knockout | Eye | Retina | 0.058094 | -4.10547 | - | - | DataSet_11_137 |
| Kdm5d | Sox11 | knockout | Brain | Cortex | 6.27399 | 2.64938 | - | - | DataSet_11_138 |
| Kdm5d | Stat4 | knockout | Lymph | Lamina propria lymphocytes | 2.02137 | 1.01533 | 0.298962754871882 | 0.924261066168849 | DataSet_11_152 |
| Kdm5d | Tbx1 | knockout | Ear | Otic vesicles | 2.16321 | 1.11317 | 0.163006800066563 | 0.996209135879357 | DataSet_11_154 |
| Kdm5d | Tet2 | shRNA | Embryo | ES cells | 2.28032 | 1.18924 | - | - | DataSet_11_161 |
| Kdm5d | Wt1 | knockout | Oviduct | Oviduct | 0.666379 | -0.585586 | 0.0524137658708253 | 0.799527697346981 | DataSet_11_180 |
| Kdm5d | Pogz | knockdown | Liver | fetal liver | 0.476565 | -1.06925 | 2.043969e-01 | 0.5051549 | DataSet_11_188 |
| Kdm5d | Cpeb1 | siRNA | Neuron | Neuro-2a | 1.69578 | 0.761945 | - | - | DataSet_11_189 |
| Kdm5d | Dnmt1 | knockout | Embryo | Embryonic fibroblasts | 2.22564 | 1.15422 | 2.324020e-02 | 9.922715e-02 | DataSet_11_192 |
| Kdm5d | Dnmt1 | shRNA | Embryo | Embryonic fibroblasts | 0.216471 | -2.20776 | - | - | DataSet_11_196 |
| Kdm5d | Crebbp | knockout | Spleen | Germinal center B cells | 2.25701 | 1.17441 | 2.505866e-01 | 0.875120084 | DataSet_11_227 |
| Kdm5d | Dux | siRNA | Embryo | ES cells | 1.88189 | 0.912182 | 4.101375e-02 | 0.7568004629 | DataSet_11_239 |
| Kdm5d | Ncl | siRNA | Embryo | ES cells | 0.456693 | -1.1307 | 2.895658e-01 | 0.6108769010 | DataSet_11_240 |
| Kdm5d | Dnmt3a | siRNA | Embryo | iPSC | 1.71647 | 0.779443 | - | - | DataSet_11_241 |
| Kdm5d | Ezh2 | knockout | Calvaria | calvaria | 0.0122631 | -6.34953 | 4.150170e-01 | 0.65904827 | DataSet_11_247 |
| Kdm5d | Dnmt1 | siRNA | Embryo | Embryo | 3.66667 | 1.87447 | - | - | DataSet_11_248 |
| Kdm5d | Kmt2d | knockout | Skin | iBiP melanoma mouse model tumor cell | 0.00601956 | -7.37612 | 1.800481e-08 | 2.763651e-05 | DataSet_11_250 |
| Kdm5d | Kdm2a | CRISPR | Embryo | ES cells | 0.204082 | -2.29278 | 0.0158889900 | 0.9447699 | DataSet_11_251 |
| Kdm5d | Eed | knockout | Brain | Forebrain | 2.02404 | 1.01724 | 1.078930e-02 | 2.757619e-01 | DataSet_11_258 |
| Kdm5d | Eed | knockout | Brain | hindbrain | 1.83494 | 0.875732 | 1.884328e-02 | 5.220734e-01 | DataSet_11_259 |
| Kdm5d | Eed | knockout | Brain | midbrain | 1.78423 | 0.835301 | 1.993213e-02 | 4.831630e-01 | DataSet_11_260 |
| Kdm5d | Eed | knockout | Spinal_cord | spinal cord | 1.818 | 0.86235 | 1.899168e-02 | 9.999790e-01 | DataSet_11_261 |
| Kdm5d | Dux | knockout | Embryo | Embryo | 0.356877 | -1.4865 | 5.947205e-01 | 7.332467e-01 | DataSet_11_269 |
| Kdm5d | Dux | knockout | Embryo | Embryo | 0.356877 | -1.4865 | 5.947204e-01 | 7.332950e-01 | DataSet_11_273 |
| Kdm5d | Lin28b | knockout | Bone_marrow | Bone marrow immature B cells | 0.487996 | -1.03506 | 4.026694e-01 | 0.9643594 | DataSet_11_274 |
| Kdm5d | Ssrp1 | CRISPR | Embryo | ES cells | 0.452381 | -1.14439 | 6.031386e-01 | 0.8838006 | DataSet_11_278 |
| Kdm5d | Setd2 | knockout | Kidney | primary renal tubular epithelial (RTE) cells | 0.284242 | -1.81481 | - | - | DataSet_11_285 |
| Kdm5d | Irf8 | knockout | Brain | mice brain | 0.260926 | -1.93829 | 9.738023e-04 | 3.230963e-01 | DataSet_11_292 |
| Kdm5d | Setd1a | shRNA | Eye | Retina | 0.554638 | -0.850382 | 5.486549e-02 | 0.1860515431 | DataSet_11_293 |
| Kdm5d | Arid2 | knockout | Muscle | LSK | 0.00833912 | -6.90589 | 6.496798e-15 | 1.621682e-11 | DataSet_11_301 |
| Kdm5d | Suz12 | knockout | Lung | Alveolar macrophage | 5.00508 | 2.32339 | 1.822032e-01 | 2.605366e-01 | DataSet_11_312 |
| Kdm5d | Irf7 | knockout | Bone_marrow | c-kit+ leukemic cells | 0.421053 | -1.24793 | - | - | DataSet_11_313 |
| Kdm5d | Actl6a | knockout | Nerve | sciatic nerve | 0.60298 | -0.729818 | 2.949919e-01 | 0.549299642 | DataSet_11_314 |
| Kdm5d | Satb2 | knockout | Colon | Intestine epithelium | 0.4009 | -1.31869 | 6.297067e-01 | 0.8011428841 | DataSet_11_316 |
| Kdm5d | Bud31 | knockout | Testis | Spermatogonial stem cells | 1.60807 | 0.685333 | 2.654662e-01 | 0.8600602 | DataSet_11_321 |
| Kdm5d | Ezh2 | shRNA | Brain | SVZ derived neural stem cells | 3.32026 | 1.7313 | 2.219787e-01 | 5.451333e-01 | DataSet_11_332 |
| Kdm5d | Ezh2 | knockout | Eye | Retina | 1.76287 | 0.81793 | 3.442852e-02 | 2.832303e-01 | DataSet_11_333 |
| Kdm5d | Atrx | knockout | Embryo | ES cells | 0.397727 | -1.33015 | - | - | DataSet_11_335 |
| Kdm5d | Hnrnpk | siRNA | Embryo | ES cells | 2.00155 | 1.00112 | 3.216539e-01 | 0.431754176 | DataSet_11_342 |
| Kdm5d | Pcbp1 | shRNA | Thymus | Th1 | 1.71468 | 0.777937 | 6.084357e-03 | 0.07163180 | DataSet_11_343 |
| Kdm5d | Dux | shRNA | Embryo | ES cells | 0.5902 | -0.760723 | 1.938828e-01 | 6.644478e-01 | DataSet_11_345 |
| Kdm5d | Setdb1 | shRNA | Embryo | ES cells | 3.05222 | 1.60986 | 1.001849e-01 | 1.000000e+00 | DataSet_11_346 |
Regulation Region
Expression Atlas of Kdm5d