Species: | Human |
Biosample type: | Cell line |
Tissue type: | Mammary gland |
Data source: | NCBI GEO/SRA |
Biosample name: | T47D |
Sample ID: | Sample_02_0532 |
Case ID: | Name:GSM2862201 |
Input ID: | Name:GSM2862196 |
Common SNP: | dbSNP |
eQTL: | GTEx, HaploReg v4.1, PancanQTL |
Risk SNP : | GWAS Catalog, GWASdb v2.0 |
TFBS: | TFBS Conserved of UCSC |
CRISPR/Cas9 target site: | CRISPR Targets of UCSC |
Read Mapping: | bowtie(v2.4.4) -p 10 -x -S -U |
Peak Calling: | macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto |
Stitching Distance: | 12.5 kb |
TSS Exclusive Zone: | +/- 2 kb |