/data/html/sedbv2/peak_detail/human/FIMO/sample_fimo/sample_TF_num/SE_02_0688_TF_num.txt

Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_068800085 chr1:1058842-1080539 21697 85 10 685 44 2 27 1353 RNF223,C1ORF159,ISG15,AGRN
SE_02_068800147 chr1:10835414-10843728 8314 147 2 268 5 0 0 0 CASZ1
SE_02_068800173 chr1:110330300-110345254 14954 173 9 357 35 3 0 674 LOC440600,RBM15,SLC16A4
SE_02_068800061 chr1:1157475-1168385 10910 61 1 441 34 0 41 292 MIR200B,MIR200A,TTLL10,LINC01342,C1ORF159,TNFRSF18,TNFRSF4,MIR429
SE_02_068800176 chr1:11907780-11910230 2450 176 1 278 20 0 0 0 RNU5E-1,KIAA2013,PLOD1,NPPB
SE_02_068800103 chr1:120304642-120356115 51473 103 17 339 81 0 151 286 PFN1P2,SEC22B
SE_02_068800229 chr1:120912119-120929332 17213 229 7 104 7 0 2 72 LINC00623,PPIAL4A,RNVU1-4
SE_02_068800207 chr1:145199638-145217112 17474 207 5 16 3 0 90 265 LOC103091866
SE_02_068800188 chr1:146368855-146388556 19701 188 5 0 63 0 0 0 RNVU1-18,NUDT4P1
SE_02_068800190 chr1:148441923-148461089 19166 190 12 66 11 0 111 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_068800125 chr1:149162341-149213534 51193 125 20 389 67 0 115 541 LOC653513,NBPF9
SE_02_068800121 chr1:149606064-149637813 31749 121 9 9 44 0 176 724 LINC00869,PPIAL4C
SE_02_068800214 chr1:149884154-149889160 5006 214 1 126 4 0 66 509 HIST2H2AB,HIST2H2AC,HIST2H2BE,BOLA1,MTMR11,HIST2H2AA3,HIST2H2BC,HIST2H3A,SV2A,HIST2H2AA4,SF3B4,HIST2H3C
SE_02_068800210 chr1:150560076-150580582 20506 210 6 544 53 4 87 915 ADAMTSL4,MCL1,ADAMTSL4-AS1,ENSA,FALEC,MIR4257
SE_02_068800076 chr1:15832839-15852892 20053 76 5 557 60 4 85 732 FLJ37453,SPEN,UQCRHL
SE_02_068800082 chr1:16638459-16667924 29465 82 7 306 9 0 17 1304 MST1P2,RNVU1-18,FAM231C,CROCCP2,NBPF1
SE_02_068800165 chr1:16739460-16741876 2416 165 1 1 0 0 0 94 RNVU1-18,MST1L,ESPNP,FAM231A
SE_02_068800050 chr1:16895234-16914973 19739 50 5 742 84 0 2 64 RNVU1-18,CROCC
SE_02_068800120 chr1:182337369-182396870 59501 120 16 1636 179 2 0 1284 GLUL,LINC00272,LINC01344,TEDDM1
SE_02_068800236 chr1:192314140-192326614 12474 236 10 289 33 1 70 20 RGS21
SE_02_068800016 chr1:192625679-192649773 24094 16 9 639 34 11 70 138 RGS13,RGS1
SE_02_068800086 chr1:193018657-193084040 65383 86 18 1371 37 3 162 965 TROVE2,UCHL5,GLRX2,CDC73
SE_02_068800115 chr1:193178478-193196124 17646 115 6 429 26 3 170 284 CDC73,B3GALT2,MIR1278
SE_02_068800054 chr1:202007752-202119075 111323 54 35 3072 159 6 189 1553 ELF3,PTPRVP,MIR6740,GPR37L1,ARL8A,PTPN7,RNPEP
SE_02_068800191 chr1:204398363-204423239 24876 191 4 574 21 4 89 825 PPP1R15B,PIK3C2B,PLEKHA6,LINC00628
SE_02_068800180 chr1:204475418-204508233 32815 180 8 862 71 6 53 370 PIK3C2B,MDM4
SE_02_068800046 chr1:207747778-207756820 9042 46 2 214 17 0 12 160 CD46,MIR29C,MIR29B2
SE_02_068800171 chr1:213982570-214003887 21317 171 6 483 25 4 357 497 PROX1-AS1,PROX1
SE_02_068800187 chr1:225766566-225780071 13505 187 5 384 40 1 62 127 SRP9,EPHX1
SE_02_068800208 chr1:226061131-226065313 4182 208 2 109 0 0 92 208 H3F3AP4,H3F3A
SE_02_068800164 chr1:228486196-228492034 5838 164 2 174 9 0 37 522 RNF187,BTNL10,HIST3H2BB,MIR4666A,HIST3H2A
SE_02_068800139 chr1:234599275-234613451 14176 139 2 392 22 2 0 780 IRF2BP2,LOC101927787,LINC00184
SE_02_068800047 chr1:244833274-244837938 4664 47 1 118 6 0 15 213 COX20,HNRNPU,HNRNPU-AS1
SE_02_068800118 chr1:244861133-244866022 4889 118 2 141 6 0 98 374 HNRNPU,COX20,HNRNPU-AS1
SE_02_068800060 chr1:244968822-244972925 4103 60 2 134 18 1 4 254 LOC101928068,EFCAB2
SE_02_068800123 chr1:26692050-26708147 16097 123 5 373 22 1 347 600 ARID1A
SE_02_068800172 chr1:45682720-45689362 6642 172 2 167 14 0 45 266 TMEM69,GPBP1L1,RPS15AP10
SE_02_068800196 chr1:46300809-46306278 5469 196 4 116 6 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_068800250 chr1:62435092-62439808 4716 250 3 169 11 7 38 341 USP1
SE_02_068800209 chr1:6445852-6451432 5580 209 1 159 16 0 89 427 ESPN,PLEKHG5,MIR4252,TNFRSF25,HES2
SE_02_068800257 chr1:76476377-76511801 35424 257 12 988 23 1 72 0 ST6GALNAC3,ST6GALNAC5
SE_02_068800170 chr1:77976087-77980700 4613 170 2 137 8 0 0 119 FUBP1,DNAJB4
SE_02_068800018 chr1_KI270713v1_random:3695-31027 27332 18 6 0 0 0 0 0 RNU1-1
SE_02_068800199 chr10:34627647-34670597 42950 199 14 1213 51 0 37 0 PARD3
SE_02_068800231 chr11:11840903-11845780 4877 231 3 119 14 0 40 295 USP47
SE_02_068800051 chr11:120236427-120261548 25121 51 12 719 27 2 152 905 POU2F3,LOC649133,OAF
SE_02_068800160 chr11:123060184-123064803 4619 160 1 206 18 2 55 359 HSPA8,SNORD14E,LOC341056,SNORD14C,SNORD14D
SE_02_068800033 chr11:12316376-12332040 15664 33 8 431 17 0 89 195 MICALCL,PARVA
SE_02_068800128 chr11:2251183-2273378 22195 128 10 709 68 2 79 638 ASCL2,TSPAN32,C11ORF21
SE_02_068800230 chr11:34044777-34054806 10029 230 2 311 29 1 63 445 CAPRIN1
SE_02_068800256 chr11:47765201-47768976 3775 256 1 114 15 0 20 219 FNBP4,AGBL2
SE_02_068800065 chr11:65416231-65427386 11155 65 6 328 11 2 41 718 NEAT1,SLC25A45,FRMD8,MIR612
SE_02_068800022 chr11:65476354-65510820 34466 22 14 1001 91 4 44 963 MALAT1,SCYL1,LTBP3,MIR612
SE_02_068800081 chr11:69270983-69312720 41737 81 15 1377 66 2 114 665 MYEOV
SE_02_068800213 chr11:69325707-69339674 13967 213 8 415 19 1 11 0 MYEOV
SE_02_068800068 chr11:73033672-73076533 42861 68 18 1017 44 1 42 0 FCHSD2
SE_02_068800154 chr11:73778745-73785033 6288 154 4 140 11 0 27 0 RAB6A,MRPL48
SE_02_068800126 chr11:79847707-79872875 25168 126 9 856 1 2 55 0 TENM4
SE_02_068800011 chr11:79931582-79949355 17773 11 5 499 1 0 76 0 TENM4
SE_02_068800025 chr11:80139714-80155561 15847 25 6 457 0 3 53 0 LOC101928944
SE_02_068800174 chr11:83155751-83160853 5102 174 2 130 4 0 120 207 PCF11,ANKRD42
SE_02_068800221 chr11:85661145-85665926 4781 221 2 96 7 0 111 515 CREBZF,TMEM126B,TMEM126A,CCDC89,DLG2
SE_02_068800228 chr11:86239464-86246487 7023 228 3 193 15 0 45 183 EED,MIR6755
SE_02_068800194 chr11:92222679-92240786 18107 194 6 477 0 1 88 0 FAT3
SE_02_068800064 chr11:92477568-92510713 33145 64 19 880 6 0 148 0 FAT3
SE_02_068800026 chr11:92524668-92613964 89296 26 28 2701 12 6 296 40 FAT3
SE_02_068800204 chr11:93737683-93742724 5041 204 3 134 10 1 8 298 TAF1D,C11ORF54,SNORA8,SNORD5,SNORD6,SNORA25,SCARNA9,MIR1304,SNORA32,SNORA40,SNORA18,MED17,SNORA1
SE_02_068800077 chr11:95788276-95792010 3734 77 1 150 17 1 40 384 CEP57,FAM76B
SE_02_068800035 chr11:95914012-95935203 21191 35 7 508 53 3 47 241 MTMR2
SE_02_068800241 chr12:104285784-104289943 4159 241 1 114 5 0 13 237 TXNRD1,EID3
SE_02_068800023 chr12:106773536-106822940 49404 23 21 1229 61 1 178 360 RIC8B,LOC100287944
SE_02_068800252 chr12:10798821-10808655 9834 252 1 291 17 2 0 210 TAS2R7,TAS2R8,TAS2R9,PRR4,LOC101928162,TAS2R10
SE_02_068800240 chr12:11179282-11189729 10447 240 1 221 54 0 0 108 TAS2R42,SMIM10L1,TAS2R30,PRH1-PRR4,PRH1
SE_02_068800249 chr12:111834702-111845361 10659 249 2 298 37 4 15 506 MAPKAPK5,MAPKAPK5-AS1,MIR6761
SE_02_068800003 chr12:114662433-114704425 41992 3 8 1105 17 5 354 1265 TBX3
SE_02_068800093 chr12:114900505-114926588 26083 93 6 743 14 24 77 0 TBX3
SE_02_068800067 chr12:121796585-121812072 15487 67 7 418 24 0 218 1742 SETD1B,LINC01089,RHOF,HPD
SE_02_068800122 chr12:12716312-12726775 10463 122 1 311 20 2 154 598 CDKN1B,APOLD1,MIR613,GPR19
SE_02_068800203 chr12:14383946-14404875 20929 203 9 456 23 4 67 31 ATF7IP
SE_02_068800127 chr12:24845987-24854567 8580 127 3 237 16 1 4 51 BCAT1
SE_02_068800225 chr12:24937637-24949921 12284 225 4 345 27 5 0 162 BCAT1,C12ORF77
SE_02_068800006 chr12:25050774-25101123 50349 6 14 1371 185 11 64 571 LRMP
SE_02_068800235 chr12:26100897-26123315 22418 235 5 573 19 2 77 475 BHLHE41,RASSF8
SE_02_068800075 chr12:45723690-45733652 9962 75 3 212 3 0 99 547 ARID2,LINC00938
SE_02_068800101 chr12:54277167-54283407 6240 101 4 206 4 0 88 410 CBX5,HNRNPA1,COPZ1,NFE2,MIR3198-2
SE_02_068800178 chr12:6953251-6965317 12066 178 2 428 22 3 135 1283 MIR200C,PTPN6,MIR141,ENO2,SCARNA12,PHB2,RNU7-1,LRRC23,C12ORF57,ATN1,EMG1
SE_02_068800181 chr12:92133662-92148178 14516 181 6 346 14 2 132 672 C12ORF79,BTG1
SE_02_068800092 chr12_GL877876v1_alt:19-32181 32162 92 16 0 0 0 0 0 TAS2R9,TAS2R7,TAS2R8,TAS2R10,TAS2R45
SE_02_068800094 chr12_KI270904v1_alt:11-32102 32091 94 14 0 0 0 0 0 TAS2R9,TAS2R7,TAS2R8,TAS2R10
SE_02_068800029 chr12_KI270904v1_alt:351710-395710 44000 29 19 0 0 0 0 0 SMIM10L1,TAS2R42,PRH1,PRH1-PRR4
SE_02_068800019 chr13:105015444-105039114 23670 19 10 694 0 0 75 0 DAOA
SE_02_068800032 chr14:34545660-34557497 11837 32 3 228 20 0 3 0 RNVU1-18,EAPP
SE_02_068800255 chr14:34872312-34876054 3742 255 2 84 13 1 19 318 BAZ1A
SE_02_068800038 chr14:55687979-55712813 24834 38 7 626 86 13 16 0 RPL13AP3
SE_02_068800107 chr14:56117388-56148848 31460 107 19 891 62 7 130 235 PELI2
SE_02_068800184 chr14:56579099-56590726 11627 184 7 332 22 2 0 263 TMEM260
SE_02_068800220 chr14:56606670-56613303 6633 220 5 206 6 3 33 137 TMEM260
SE_02_068800106 chr14:68789222-68796617 7395 106 3 293 4 3 164 825 ZFP36L1
SE_02_068800007 chr14:79517685-79712664 194979 7 76 5473 4 28 670 165 NRXN3
SE_02_068800116 chr14:81218784-81222323 3539 116 1 86 5 0 102 354 GTF2A1,SNORA79
SE_02_068800141 chr14:91507810-91511519 3709 141 1 116 1 0 39 355 PPP4R3A
SE_02_068800104 chr14:95645862-95680529 34667 104 11 1066 86 2 10 1456 TCL6,TCL1B,TCL1A
SE_02_068800144 chr15:42269014-42281830 12816 144 5 380 33 2 32 411 TMEM87A,GANC
SE_02_068800108 chr15:80383523-80416048 32525 108 12 902 66 2 111 178 ARNT2,LINC00927
SE_02_068800089 chr15:92807753-92833255 25502 89 6 787 15 0 46 0 LINC01578,ASB9P1
SE_02_068800056 chr15:92899770-92918378 18608 56 3 531 18 0 136 299 CHD2,MIR3175,LINC01578
SE_02_068800185 chr15:98851872-98867868 15996 185 3 453 13 1 89 0 IGF1R,MIR4714
SE_02_068800110 chr16:47438058-47467257 29199 110 8 717 25 1 78 465 PHKB,ITFG1
SE_02_068800091 chr16:72424015-72432232 8217 91 2 190 10 0 160 490 LINC01572
SE_02_068800095 chr16:72913272-72962049 48777 95 24 1630 62 4 399 761 ZFHX3
SE_02_068800055 chr16:73016143-73071907 55764 55 13 1524 40 6 620 430 ZFHX3,HCCAT5
SE_02_068800049 chr17:39194813-39210113 15300 49 4 468 33 2 117 706 RPL19,CACNB1,PLXDC1,ARL5C,STAC2
SE_02_068800212 chr17:39453643-39465464 11821 212 3 290 25 1 48 371 CDK12,MED1
SE_02_068800001 chr17:43231390-43323823 92433 1 50 530 75 0 8 359 RNU2-1,TMEM106A,LINC00854
SE_02_068800031 chr17:43358736-43370793 12057 31 4 499 86 3 0 150 LINC00910,ARL4D
SE_02_068800071 chr17:45146592-45155726 9134 71 3 265 20 1 117 797 HEXIM1,MIR6784,HEXIM2,PLCD3,ACBD4
SE_02_068800098 chr17:48045951-48069094 23143 98 10 603 74 6 323 1632 NFE2L1,SNX11,CBX1,COPZ2,MIR152
SE_02_068800195 chr17:58004872-58008637 3765 195 2 107 4 0 133 343 SRSF1,VEZF1,CUEDC1
SE_02_068800254 chr17:58412215-58417605 5390 254 2 98 6 1 64 239 RNF43
SE_02_068800079 chr17:59617427-59627433 10006 79 4 242 28 0 73 205 CLTC
SE_02_068800027 chr17:59829139-59860777 31638 27 11 743 66 2 115 358 TUBD1,MIR21,VMP1,RPS6KB1
SE_02_068800021 chr17:62965386-62976427 11041 21 4 250 20 0 121 0 TANC2,MIR633
SE_02_068800146 chr17:63771595-63780820 9225 146 2 289 32 0 41 368 DDX42,CCDC47,PSMC5,STRADA,FTSJ3
SE_02_068800244 chr17:63834854-63850869 16015 244 6 356 57 4 111 749 SMARCD2,CSH2,PSMC5,CSH1,GH2,TCAM1P,FTSJ3
SE_02_068800113 chr17:64503744-64508565 4821 113 2 235 17 3 71 433 DDX5,CEP95,POLG2,MIR5047,MIR3064
SE_02_068800186 chr17:72120933-72183665 62732 186 19 1781 18 5 413 801 SOX9,LOC101928205,SOX9-AS1
SE_02_068800097 chr17:77095738-77106345 10607 97 1 317 33 0 5 43 SEC14L1,SCARNA16,MIR6516
SE_02_068800014 chr17:77126605-77217343 90738 14 24 2799 262 18 189 1768 SEC14L1,MIR6516,SCARNA16
SE_02_068800138 chr17:81509705-81520757 11052 138 4 533 55 1 116 635 ACTG1,FSCN2,FAAP100,NPLOC4
SE_02_068800175 chr18:26649995-26660046 10051 175 2 292 30 2 97 70 KCTD1,PCAT18
SE_02_068800234 chr18:55892537-55895198 2661 234 2 79 5 0 8 0 LINC01416
SE_02_068800143 chr18:57915641-57947594 31953 143 11 917 69 0 71 0 NEDD4L
SE_02_068800215 chr18:58838044-58874102 36058 215 7 894 20 5 198 563 ZNF532
SE_02_068800044 chr18:63067614-63076409 8795 44 3 276 12 2 19 0 BCL2
SE_02_068800039 chr18:63130243-63182927 52684 39 26 1392 18 8 211 0 BCL2
SE_02_068800201 chr18:63313219-63323109 9890 201 5 219 15 0 82 319 BCL2,KDSR
SE_02_068800211 chr19:18279235-18292265 13030 211 2 339 50 1 99 707 MIR3188,JUND,PDE4C,LSM4,PGPEP1,LOC729966,KIAA1683
SE_02_068800111 chr19:41262436-41267425 4989 111 2 107 5 0 64 511 HNRNPUL1,AXL,CCDC97
SE_02_068800045 chr19:44577185-44615883 38698 45 15 1126 107 3 0 104 IGSF23,MIR4531,CEACAM22P,CEACAM20,PVR
SE_02_068800192 chr19:46600310-46604222 3912 192 2 95 3 0 56 454 PPP5D1,CALM3,PTGIR,GNG8
SE_02_068800034 chr19:47095087-47114814 19727 34 4 563 16 1 167 324 ZC3H4,TMEM160,SAE1
SE_02_068800232 chr2:130341832-130348734 6902 232 1 239 13 1 52 672 CCDC115,IMP4,PTPN18
SE_02_068800197 chr2:177210725-177214784 4059 197 1 144 0 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_068800130 chr2:189770569-189799167 28598 130 8 726 75 4 21 570 PMS1,ORMDL1,OSGEPL1,OSGEPL1-AS1
SE_02_068800145 chr2:200861379-200865420 4041 145 1 121 7 0 6 229 CLK1,RNU6-31P,PPIL3,BZW1,NIF3L1,LOC101927795
SE_02_068800057 chr2:204144386-204153532 9146 57 1 241 1 1 38 0 ICOS
SE_02_068800048 chr2:204224547-204241194 16647 48 7 424 1 0 162 0 ICOS
SE_02_068800012 chr2:204324743-204380683 55940 12 9 1578 1 4 349 0 PARD3B
SE_02_068800084 chr2:204543176-204576927 33751 84 8 907 1 1 114 201 PARD3B
SE_02_068800114 chr2:207163233-207167697 4464 114 2 120 7 0 109 382 KLF7,MIR7845
SE_02_068800074 chr2:231705154-231711752 6598 74 1 274 14 1 117 748 PTMA,MIR1244-2
SE_02_068800223 chr2:241313992-241318522 4530 223 1 0 19 0 31 493 SEPT2,HDLBP,FARP2
SE_02_068800066 chr2:38346799-38378532 31733 66 5 1116 54 6 76 247 ATL2
SE_02_068800040 chr2:38432104-38484412 52308 40 15 1669 158 2 101 0 LOC101929596
SE_02_068800216 chr2:47327775-47347405 19630 216 3 680 26 0 12 65 BCYRN1,LOC101927043,MIR559,EPCAM
SE_02_068800135 chr2:55615360-55620167 4807 135 2 155 28 2 26 344 PPP4R3B
SE_02_068800119 chr2:69724575-69791361 66786 119 24 1817 208 4 43 540 ANXA4,GMCL1
SE_02_068800083 chr2:70070970-70090328 19358 83 3 624 53 0 130 800 PCBP1-AS1,PCBP1,LOC100133985
SE_02_068800131 chr2:85536515-85542754 6239 131 5 210 20 1 90 742 PARTICL,MAT2A,VAMP8,GGCX,VAMP5
SE_02_068800217 chr2:88015454-88025526 10072 217 4 361 16 2 0 0 KRCC1,RGPD1,SMYD1
SE_02_068800168 chr20:1465417-1503739 38322 168 11 1146 171 3 19 1137 SIRPB2,NSFL1C
SE_02_068800153 chr20:17965050-17976533 11483 153 3 354 49 1 50 500 SNX5,MGME1,SNORD17
SE_02_068800140 chr20:31587506-31613452 25946 140 11 806 78 4 172 400 MIR3193,ID1,COX4I2,MCTS2P,HM13-AS1
SE_02_068800157 chr20:47349873-47361521 11648 157 2 266 2 3 126 718 ZMYND8,LOC100131496
SE_02_068800149 chr20:47560459-47592891 32432 149 11 766 51 2 21 43 NCOA3
SE_02_068800005 chr20:57381982-57508831 126849 5 57 4241 235 39 139 1757 CTCFL,RBM38,RAE1,MTRNR2L3
SE_02_068800158 chr21:33540498-33544334 3836 158 1 149 5 1 40 282 GART,SON,DNAJC28,DONSON,MIR6501
SE_02_068800155 chr21:36243633-36263564 19931 155 7 671 47 3 101 756 DOPEY2,MORC3
SE_02_068800243 chr21:37365129-37370131 5002 243 3 146 10 1 26 159 DYRK1A
SE_02_068800156 chr21:43303584-43327178 23594 156 10 847 14 1 10 0 LINC00322,TCONS_00029157
SE_02_068800247 chr21:43342851-43383333 40482 247 8 1616 106 8 49 0 TCONS_00029157,LINC00322
SE_02_068800134 chr22:29266552-29270987 4435 134 2 154 4 0 29 314 RHBDD3,EWSR1,RASL10A,GAS2L1
SE_02_068800010 chr22:46052479-46083153 30674 10 1 848 45 4 265 685 PRR34,PRR34-AS1,MIR3619,LINC00899,LOC730668,MIRLET7BHG,MIRLET7A3,MIR4763,MIRLET7B
SE_02_068800198 chr3:120091294-120096844 5550 198 3 159 8 1 113 433 GSK3B
SE_02_068800246 chr3:134483730-134487908 4178 246 1 125 16 0 12 336 CEP63,ANAPC13,MIR4788
SE_02_068800245 chr3:149963581-149972719 9138 245 3 272 12 2 149 639 LOC646903,PFN2,TMEM183B
SE_02_068800159 chr3:196995533-197041304 45771 159 18 1577 89 4 109 2697 MFI2-AS1,MFI2,PIGZ
SE_02_068800030 chr3:197144565-197186140 41575 30 13 1170 78 0 107 141 DLG1
SE_02_068800163 chr3:20081488-20122530 41042 163 16 1070 160 4 44 296 KAT2B,MIR3135A
SE_02_068800148 chr4:55609408-55636904 27496 148 6 588 85 3 35 191 NMU,PDCL2
SE_02_068800052 chr4:73574014-73621072 47058 52 22 1329 128 2 106 568 RASSF6
SE_02_068800238 chr4:90127108-90145651 18543 238 9 433 11 0 61 160 CCSER1
SE_02_068800105 chr5:124736163-124749976 13813 105 4 305 1 2 294 346 ZNF608
SE_02_068800042 chr5:139633693-139711740 78047 42 43 1803 111 7 1065 572 CXXC5,LOC101929696
SE_02_068800037 chr5:39048985-39079798 30813 37 11 829 58 2 88 198 RICTOR
SE_02_068800069 chr5:6044019-6072301 28282 69 7 769 1 2 42 0 FLJ33360,MED10
SE_02_068800189 chr6:123801947-123811684 9737 189 5 259 0 0 54 140 NKAIN2
SE_02_068800063 chr6:20559630-20631855 72225 63 19 2000 108 15 247 81 CDKAL1
SE_02_068800017 chr6:21499993-21542678 42685 17 11 981 24 1 173 0 LINC00581
SE_02_068800041 chr6:21583999-21610399 26400 41 8 643 8 1 254 811 SOX4
SE_02_068800183 chr6:24718271-24722321 4050 183 2 112 14 1 79 93 C6ORF62
SE_02_068800242 chr6:26053475-26066678 13203 242 2 419 31 6 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A
SE_02_068800233 chr6:26118646-26127430 8784 233 5 321 42 13 52 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C
SE_02_068800205 chr6:26203123-26207463 4340 205 1 176 28 3 0 91 HIST1H4E,HIST1H4G,HIST1H3E,HIST1H2BE,HIST1H4D,HIST1H2BG,HIST1H2BF,HIST1H2AE,HIST1H2BD,HIST1H4F,HIST1H1E,HIST1H1D,HIST1H2BH,HIST1H2AD,HIST1H3F
SE_02_068800227 chr6:27890965-27903707 12742 227 3 389 35 7 33 317 HIST1H2BO,HIST1H2AM,HIST1H2AL,HIST1H3I,HIST1H4L,HIST1H3J,OR2B2,HIST1H1B
SE_02_068800099 chr6:3226112-3234130 8018 99 3 194 10 0 65 413 TUBB2B,PSMG4,LOC100507194
SE_02_068800102 chr6:35808602-35857805 49203 102 20 1304 159 7 60 753 LHFPL5,SRPK1,CLPS,CLPSL2,CLPSL1
SE_02_068800193 chr6:36593145-36598579 5434 193 4 197 22 0 33 158 SRSF3,STK38,MIR3925
SE_02_068800167 chr6:79304827-79314475 9648 167 2 335 10 1 4 721 LCAL1
SE_02_068800151 chr6:93393426-93427211 33785 151 17 853 6 1 180 325 EPHA7
SE_02_068800162 chr7:105010393-105018359 7966 162 4 231 6 0 101 718 KMT2E,KMT2E-AS1,LINC01004
SE_02_068800109 chr7:10934482-10950517 16035 109 3 579 39 0 55 145 NDUFA4,PHF14
SE_02_068800219 chr7:10973303-10984923 11620 219 6 345 26 1 75 321 PHF14,NDUFA4
SE_02_068800008 chr7:11312662-11341899 29237 8 8 971 29 1 113 0 PHF14
SE_02_068800177 chr7:12464740-12497708 32968 177 9 1198 268 2 47 0 VWDE
SE_02_068800073 chr7:137654280-137674467 20187 73 10 591 0 2 47 46 DGKI
SE_02_068800024 chr7:137714626-137778971 64345 24 18 1758 40 4 181 0 DGKI
SE_02_068800117 chr7:139358228-139362555 4327 117 2 138 17 0 39 227 C7ORF55-LUC7L2,LUC7L2,C7ORF55
SE_02_068800020 chr7:141781890-141797457 15567 20 4 436 49 1 8 187 TAS2R5,SSBP1,TAS2R3,WEE2-AS1,TAS2R4,PRSS37
SE_02_068800004 chr7:141965476-141986108 20632 4 3 478 17 5 29 159 TAS2R38,OR9A4,MGAM,CLEC5A
SE_02_068800100 chr7:23463018-23477039 14021 100 4 316 17 1 133 262 IGF2BP3,RPS2P32
SE_02_068800169 chr7:25721629-25744395 22766 169 10 717 71 0 134 0 MIR148A
SE_02_068800179 chr7:26196584-26204485 7901 179 4 361 11 0 89 501 HNRNPA2B1,CBX3,NFE2L3
SE_02_068800070 chr7:29189435-29206887 17452 70 15 423 13 1 118 340 CHN2,LOC102724484,CPVL
SE_02_068800009 chr7:29224769-29320552 95783 9 50 2738 159 20 256 42 CHN2,LOC102724484
SE_02_068800206 chr7:30593720-30597101 3381 206 1 100 8 0 18 181 GARS,LOC401320
SE_02_068800218 chr7:32879193-32908389 29196 218 7 698 64 2 62 260 KBTBD2,RP9P,FKBP9
SE_02_068800152 chr7:39012858-39017208 4350 152 2 111 5 0 4 131 POU6F2,VPS41
SE_02_068800072 chr7:5419557-5440013 20456 72 4 703 13 0 255 846 TNRC18
SE_02_068800137 chr7:8260294-8265689 5395 137 2 184 18 0 42 266 LOC100505938,ICA1
SE_02_068800251 chr7:90593431-90613653 20222 251 9 518 45 2 119 229 CDK14
SE_02_068800132 chr7:92807632-92837339 29707 132 9 630 13 1 204 445 CDK6,LOC101927497
SE_02_068800096 chr7:93217524-93228020 10496 96 3 220 10 0 79 154 HEPACAM2,VPS50
SE_02_068800087 chr8:100948275-100954345 6070 87 2 185 10 0 69 706 YWHAZ
SE_02_068800222 chr8:101096312-101137584 41272 222 11 1210 15 8 52 0 FLJ42969
SE_02_068800136 chr8:101490658-101495481 4823 136 2 116 3 0 69 116 GRHL2
SE_02_068800200 chr8:109131240-109136016 4776 200 2 113 6 0 10 0 TRHR
SE_02_068800248 chr8:114585781-114587988 2207 248 1 86 0 0 5 0
SE_02_068800237 chr8:116872215-116875405 3190 237 1 88 10 0 30 233 RAD21-AS1,RAD21,MIR3610
SE_02_068800253 chr8:119207869-119211014 3145 253 1 77 8 1 65 175 MAL2
SE_02_068800062 chr8:123386359-123409294 22935 62 7 629 19 1 22 518 ATAD2,WDYHV1,MIR548AA1,MIR548D1
SE_02_068800150 chr8:124275049-124281002 5953 150 3 173 12 0 12 0 LOC101927588
SE_02_068800053 chr8:124471523-124476948 5425 53 3 126 10 1 12 319 RNF139,RNF139-AS1,MIR6844,TRMT12
SE_02_068800028 chr8:124703466-124728871 25405 28 6 784 33 4 187 264 MTSS1
SE_02_068800090 chr8:125422389-125435548 13159 90 4 346 2 2 215 568 TRIB1
SE_02_068800133 chr8:126553618-126558491 4873 133 1 125 1 0 95 785 FAM84B
SE_02_068800002 chr8:126804847-126882614 77767 2 17 2202 29 9 163 0 PCAT1
SE_02_068800080 chr8:127002168-127019346 17178 80 7 531 27 4 40 128 PCAT1
SE_02_068800036 chr8:127734174-127752400 18226 36 2 521 4 2 111 655 MYC,MIR1204,CASC11
SE_02_068800112 chr8:127788811-127826557 37746 112 12 1033 37 4 44 207 MIR1204
SE_02_068800202 chr8:17921682-17925344 3662 202 1 190 24 1 24 195 PCM1,FGL1
SE_02_068800015 chr8:52418089-52471600 53511 15 25 1566 139 2 107 0 ST18
SE_02_068800059 chr8:72534103-72545445 11342 59 3 238 16 3 79 216 KCNB2
SE_02_068800058 chr8:72563558-72648158 84600 58 25 2198 98 3 210 120 KCNB2
SE_02_068800088 chr8:76673668-76688274 14606 88 7 332 6 0 337 205 ZFHX4-AS1,ZFHX4
SE_02_068800182 chr9:1047332-1083711 36379 182 8 1530 75 5 132 673 DMRT2,LINC01230
SE_02_068800142 chr9:120627796-120715654 87858 142 31 2159 220 5 257 565 MEGF9,CDK5RAP2
SE_02_068800224 chr9:32336362-32350802 14440 224 11 388 29 3 50 0 ACO1
SE_02_068800129 chr9:3524386-3528767 4381 129 1 149 5 0 93 136 RFX3
SE_02_068800161 chr9:70411928-70421549 9621 161 3 219 14 0 245 385 KLF9
SE_02_068800166 chr9:72349307-72366341 17034 166 4 434 30 2 131 970 ZFAND5,LINC01504
SE_02_068800043 chrX:115719101-115738952 19851 43 11 43 2 0 0 0 PLS3,PLS3-AS1
SE_02_068800013 chrX:115843398-115889130 45732 13 21 31 0 0 0 0 DANT2
SE_02_068800078 chrX:153970494-153974826 4332 78 2 74 2 1 81 436 HCFC1,TMEM187,MIR3202-1,NAA10,IRAK1,ARHGAP4,MIR718,HCFC1-AS1,MIR3202-2,RENBP
SE_02_068800124 chrX:15491557-15520800 29243 124 9 546 47 0 93 483 BMX,PIR,PIR-FIGF
SE_02_068800239 chrX:41083931-41088732 4801 239 1 96 4 0 76 228 USP9X
SE_02_068800226 chrX:56763697-56789295 25598 226 7 341 21 1 0 0 LINC01420,UQCRBP1

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM3165639
Input ID: Name:GSM3165640
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb