/data/html/sedbv2/peak_detail/human/FIMO/sample_fimo/sample_TF_num/SE_02_1373_TF_num.txt

Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_137300148 chr1:150561014-150579635 18621 148 10 492 47 3 81 652 MCL1,ADAMTSL4-AS1,ADAMTSL4,ENSA,FALEC,MIR4257
SE_02_137300154 chr1:151972702-151996847 24145 154 8 585 93 0 91 414 S100A10,NBPF18P,S100A11
SE_02_137300054 chr1:156096919-156130861 33942 54 17 813 71 4 245 674 LMNA,LAMTOR2,RAB25,UBQLN4,SEMA4A,MEX3A
SE_02_137300084 chr1:15828215-15850377 22162 84 6 627 67 4 65 732 FLJ37453,SPEN,UQCRHL
SE_02_137300076 chr1:16133833-16182867 49034 76 26 1349 127 2 230 1056 EPHA2,ARHGEF19
SE_02_137300183 chr1:161382703-161400554 17851 183 4 442 60 1 0 94 CFAP126
SE_02_137300231 chr1:16889096-16905240 16144 231 5 665 63 1 0 177 RNVU1-18,CROCC,MFAP2
SE_02_137300142 chr1:181089550-181120185 30635 142 16 837 46 2 272 249 IER5
SE_02_137300209 chr1:18926324-18954725 28401 209 11 809 72 1 121 0 IFFO2,MIR1290,MIR4695,ALDH4A1
SE_02_137300031 chr1:234599662-234620535 20873 31 9 578 40 2 0 780 IRF2BP2,LOC101927787,LINC00184
SE_02_137300036 chr1:234955169-234999367 44198 36 22 1352 63 6 183 308 LOC101927851
SE_02_137300089 chr1:235066900-235084377 17477 89 6 133 22 0 11 0 LINC01348,SNORA14B,TOMM20
SE_02_137300188 chr1:23554395-23563380 8985 188 5 327 19 1 137 382 ID3,E2F2,LOC101928163
SE_02_137300131 chr1:235902833-235919405 16572 131 9 495 30 2 33 0 MIR1537,LYST
SE_02_137300153 chr1:23951391-23964846 13455 153 6 43 29 2 47 365 SRSF10,PNRC2,MIR378F,CNR2
SE_02_137300191 chr1:244964178-244972978 8800 191 2 277 28 1 7 254 LOC101928068,EFCAB2
SE_02_137300144 chr1:26692040-26706931 14891 144 7 345 20 1 345 600 ARID1A
SE_02_137300141 chr1:31930930-31956800 25870 141 9 688 29 2 0 226 PTP4A2
SE_02_137300065 chr1:39154865-39205957 51092 65 22 1270 84 3 160 147 MACF1,NDUFS5
SE_02_137300006 chr1:8003544-8099279 95735 6 33 2297 176 5 337 567 ERRFI1,PARK7
SE_02_137300200 chr1:8118167-8138811 20644 200 6 693 92 1 30 0 LOC102724539
SE_02_137300091 chr1:8181161-8212835 31674 91 14 999 41 2 23 0 LOC102724539
SE_02_137300045 chr1:85276881-85344562 67681 45 17 1675 194 116 109 475 DDAH1,BCL10,LOC646626,C1ORF52
SE_02_137300086 chr1:85569711-85585045 15334 86 7 405 26 1 178 646 CYR61,DDAH1
SE_02_137300121 chr1:8872890-8900803 27913 121 7 828 81 0 20 387 ENO1,ENO1-AS1,CA6,MIR6728
SE_02_137300172 chr1:94218411-94248107 29696 172 16 653 35 1 112 253 ARHGAP29
SE_02_137300167 chr1:94322062-94335746 13684 167 9 336 20 1 24 0 ABCD3
SE_02_137300170 chr1_KI270713v1_random:21799-22711 912 170 2 0 0 0 0 0 RNU1-1
SE_02_137300211 chr10:104119605-104121837 2232 211 2 51 9 0 22 0 COL17A1,SFR1
SE_02_137300088 chr10:114623786-114651582 27796 88 11 806 29 0 73 136 ABLIM1
SE_02_137300146 chr10:114697033-114719622 22589 146 11 568 36 0 53 0 LOC101927692,ABLIM1
SE_02_137300171 chr10:119652931-119687537 34606 171 24 1104 114 2 141 539 BAG3,INPP5F
SE_02_137300041 chr10:32938343-32986881 48538 41 23 1283 130 9 59 318 ITGB1
SE_02_137300032 chr10:3754716-3787601 32885 32 12 1006 43 4 280 1028 KLF6
SE_02_137300059 chr10:3802841-3812342 9501 59 2 315 1 2 83 0 KLF6
SE_02_137300048 chr10:3873433-3912270 38837 48 24 1367 63 6 88 0 MIR6078
SE_02_137300056 chr10:43399339-43421376 22037 56 8 638 74 0 36 346 HNRNPF,ZNF487,FXYD4
SE_02_137300039 chr10:4650243-4688333 38090 39 14 1133 31 2 47 416 LINC00705,LINC00704
SE_02_137300072 chr10:71836062-71871933 35871 72 15 1035 94 4 12 183 PSAP,CDH23,MIR7152
SE_02_137300133 chr10:73906112-73917435 11323 133 7 325 27 2 68 1195 C10ORF55,PLAU,CAMK2G
SE_02_137300212 chr10:77613242-77635822 22580 212 10 595 50 0 82 45 KCNMA1
SE_02_137300029 chr10:93435535-93480439 44904 29 22 1302 171 6 109 149 MYOF,CEP55
SE_02_137300157 chr11:102305940-102322689 16749 157 8 476 17 0 15 192 BIRC3,BIRC2
SE_02_137300177 chr11:102598436-102613052 14616 177 5 468 79 1 32 267 MMP20
SE_02_137300186 chr11:10302230-10323078 20848 186 4 457 46 8 164 530 CAND1.11,ADM,SBF2
SE_02_137300060 chr11:118907419-118930166 22747 60 17 540 37 2 423 636 BCL9L,MIR4492,CXCR5,UPK2,FOXR1
SE_02_137300162 chr11:12159918-12183687 23769 162 6 729 62 3 61 109 MICAL2,MIR6124
SE_02_137300094 chr11:122154520-122198783 44263 94 18 1185 29 5 200 59 MIR100HG,MIR100,MIRLET7A2,BLID
SE_02_137300149 chr11:128496030-128510612 14582 149 9 379 3 0 137 0 ETS1,MIR6090,LOC101929517
SE_02_137300165 chr11:129141825-129146730 4905 165 3 120 9 0 3 0 ARHGAP32
SE_02_137300063 chr11:33689062-33707975 18913 63 9 552 56 2 53 1075 CD59,C11ORF91
SE_02_137300047 chr11:35139126-35182468 43342 47 34 1326 86 15 260 247 CD44,LOC100507144
SE_02_137300220 chr11:46553302-46561726 8424 220 7 193 6 0 18 0 AMBRA1
SE_02_137300129 chr11:62542553-62561130 18577 129 15 443 33 2 209 354 AHNAK,MIR3654,EEF1G,TUT1,MTA2,MIR6747
SE_02_137300197 chr11:64851190-64870820 19630 197 10 643 56 0 101 889 EHD1,ATG2A,MEN1,MAP4K2,MIR6749,CDC42BPG,MIR192,MIR6750,MIR194-2
SE_02_137300016 chr11:65416623-65455805 39182 16 20 1080 80 2 47 2791 NEAT1,MIR612,MALAT1,SLC25A45,FRMD8
SE_02_137300005 chr11:65470736-65509129 38393 5 17 1099 113 4 50 963 MALAT1,SCYL1,LTBP3,NEAT1,MIR612
SE_02_137300020 chr11:65892509-65917911 25402 20 11 642 79 3 181 866 FOSL1,C11ORF68,MUS81,SART1,TSGA10IP,CCDC85B,CTSW,EFEMP2,DRAP1,FIBP,CFL1
SE_02_137300217 chr11:67351471-67357350 5879 217 4 151 7 0 82 451 POLD4,LOC100130987,RAD9A,CLCF1,PPP1CA,TBC1D10C,SSH3
SE_02_137300224 chr11:69294200-69302854 8654 224 6 298 15 1 51 601 MYEOV
SE_02_137300113 chr11:86734939-86745270 10331 113 8 286 29 5 53 0 PRSS23
SE_02_137300180 chr11:8681944-8684461 2517 180 1 113 9 1 28 336 SNORA45A,RPL27A,TRIM66,SNORA45B
SE_02_137300189 chr11:9361328-9365277 3949 189 3 108 11 0 0 0 TMEM41B,IPO7
SE_02_137300023 chr11:9564899-9577019 12120 23 6 301 25 1 102 530 WEE1
SE_02_137300044 chr12:104275821-104316335 40514 44 27 1063 98 2 50 704 TXNRD1,EID3
SE_02_137300068 chr12:108825367-108855845 30478 68 8 847 28 2 40 163 SSH1,MIR619,DAO
SE_02_137300080 chr12:120225147-120264243 39096 80 28 979 62 0 122 251 PXN,SIRT4,RNU4-1,GCN1,PXN-AS1,RPLP0,RNU4-2
SE_02_137300206 chr12:121799740-121803441 3701 206 1 90 7 0 74 355 LINC01089,RHOF,SETD1B
SE_02_137300035 chr12:122862267-122899436 37169 35 13 1053 57 0 105 1057 VPS37B,HIP1R
SE_02_137300100 chr12:124512291-124552206 39915 100 20 1341 67 4 116 219 NCOR2
SE_02_137300052 chr12:124904508-124939936 35428 52 18 1201 45 4 71 1044 MIR5188,UBC,SCARB1,DHX37
SE_02_137300135 chr12:12714758-12736981 22223 135 10 574 48 2 177 598 CDKN1B,APOLD1,MIR613,GPR19
SE_02_137300225 chr12:12870742-12903845 33103 225 19 1017 54 2 54 383 RPL13AP20,GPRC5A,MIR614,GPRC5D
SE_02_137300201 chr12:53979947-53984859 4912 201 1 130 5 0 73 0 HOXC-AS3,HOXC12,HOTAIR,HOXC4,HOXC11,HOXC-AS2,HOXC13,HOXC9,HOXC6,HOXC8,HOXC-AS1,MIR196A2,HOXC13-AS,HOXC10,HOXC5,MIR615
SE_02_137300187 chr12:53990835-53998219 7384 187 1 195 11 0 138 102 MIR196A2,HOXC-AS2,HOXC12,HOTAIR,HOXC4,HOXC11,HOXC5,HOXC9,HOXC6,HOXC8,HOXC-AS1,HOXC10,MIR615,HOXC-AS3
SE_02_137300215 chr12:65941030-65954091 13061 215 8 292 11 3 57 213 HMGA2,LOC100129940
SE_02_137300174 chr12:75943718-75955097 11379 174 7 273 4 0 29 0 PHLDA1
SE_02_137300042 chr12:75975781-75987527 11746 42 5 289 5 0 30 0 PHLDA1
SE_02_137300033 chr12:76018054-76037628 19574 33 13 503 9 1 99 792 PHLDA1,NAP1L1
SE_02_137300123 chr13:114099086-114131617 32531 123 21 1095 102 2 39 0 RASA3
SE_02_137300015 chr13:97222369-97342691 120322 15 61 3019 109 14 507 159 MBNL2,LINC00456
SE_02_137300227 chr14:68792005-68796369 4364 227 1 209 3 3 80 476 ZFP36L1
SE_02_137300226 chr15:100955808-100961099 5291 226 3 162 19 0 2 0 LRRK1
SE_02_137300012 chr15:60359367-60407474 48107 12 20 1278 94 6 151 465 ANXA2
SE_02_137300175 chr15:63496670-63510843 14173 175 6 415 23 1 130 198 USP3
SE_02_137300003 chr15:67066065-67179866 113801 3 68 3141 260 48 402 713 SMAD3
SE_02_137300192 chr15:70759297-70795882 36585 192 13 1050 119 0 61 133 UACA
SE_02_137300173 chr15:85402118-85415342 13224 173 7 409 36 5 13 0 AKAP13,MIR7706
SE_02_137300019 chr15:90154726-90233938 79212 19 42 2615 341 3 289 2512 CIB1,SEMA4B,NGRN,TTLL13P,GDPGP1
SE_02_137300107 chr15:90394448-90419091 24643 107 6 729 96 1 64 0 IQGAP1,ZNF774,GABARAPL3
SE_02_137300051 chr15:92797483-92832899 35416 51 18 1099 32 0 47 0 LINC01578,ASB9P1
SE_02_137300101 chr16:29260744-29274204 13460 101 8 490 75 0 0 0 SNX29P2
SE_02_137300178 chr16:86569530-86590933 21403 178 11 807 87 4 0 659 FOXL1,FOXC2-AS1,FOXC2,MTHFSD,FLJ30679
SE_02_137300116 chr16:88233444-88246997 13553 116 15 543 16 0 14 0 LOC101928880
SE_02_137300115 chr16:89315305-89347423 32118 115 15 1217 72 3 18 678 LOC100287036,ANKRD11
SE_02_137300114 chr17:15944758-15966752 21994 114 19 700 61 0 37 265 ADORA2B,ZSWIM7,TTC19
SE_02_137300166 chr17:17682039-17695700 13661 166 11 365 19 0 122 0 RAI1,SMCR2
SE_02_137300099 chr17:42246713-42276085 29372 99 25 660 61 0 109 6 STAT5B,STAT5A
SE_02_137300037 chr17:43231407-43253461 22054 37 12 0 0 0 0 0 RNU2-1,TMEM106A,LINC00854
SE_02_137300017 chr17:43266752-43301465 34713 17 15 0 0 0 0 0 RNU2-1,LINC00854
SE_02_137300179 chr17:43359091-43369719 10628 179 5 470 79 3 0 10 ARL4D,LINC00910
SE_02_137300181 chr17:48541220-48548378 7158 181 1 167 16 1 161 624 HOXB2,HOXB-AS1,HOXB3,HOXB-AS3,HOXB1,MIR10A,HOXB4,HOXB5
SE_02_137300158 chr17:48569816-48576598 6782 158 1 161 14 1 124 364 HOXB3,HOXB4,HOXB-AS3,HOXB1,HOXB2,HOXB9,MIR10A,HOXB6,HOXB8,HOXB-AS1,HOXB5,HOXB7
SE_02_137300137 chr17:48578565-48583814 5249 137 1 118 7 1 72 163 MIR10A,HOXB3,HOXB-AS3,HOXB1,HOXB2,HOXB7,HOXB9,HOXB6,HOXB4,HOXB8,HOXB-AS1,HOXB5,MIR196A1
SE_02_137300117 chr17:48583948-48592481 8533 117 1 200 27 1 123 425 HOXB-AS3,HOXB5,HOXB3,HOXB2,HOXB7,HOXB9,MIR10A,HOXB6,HOXB4,HOXB8,HOXB-AS1,MIR196A1
SE_02_137300140 chr17:48593867-48600065 6198 140 1 157 16 0 149 669 HOXB6,HOXB-AS3,HOXB3,HOXB2,HOXB7,HOXB9,MIR10A,HOXB4,HOXB8,HOXB-AS1,HOXB5,MIR196A1
SE_02_137300127 chr17:50047345-50066820 19475 127 17 534 52 5 156 1094 ITGA3,LOC284080,PDK2
SE_02_137300207 chr17:51121081-51122964 1883 207 1 43 2 0 7 0 NME2,NME1,SPAG9,NME1-NME2
SE_02_137300230 chr17:57934832-57953131 18299 230 7 458 21 0 49 0 CUEDC1,VEZF1
SE_02_137300038 chr17:59751850-59805738 53888 38 25 1126 106 5 91 71 VMP1,PTRH2,MIR21
SE_02_137300013 chr17:59824931-59856481 31550 13 16 713 61 1 118 260 MIR21,VMP1,RPS6KB1,TUBD1
SE_02_137300049 chr17:72390413-72432992 42579 49 22 1223 12 5 179 424 LINC00673
SE_02_137300030 chr17:72445764-72521560 75796 30 31 2266 11 6 307 0 LINC00673
SE_02_137300229 chr17:75784758-75786950 2192 229 1 65 2 0 42 101 UNK,GALK1,H3F3B,MIR4738
SE_02_137300196 chr17:77120959-77130060 9101 196 8 251 6 1 8 0 SEC14L1,SCARNA16,MIR6516
SE_02_137300064 chr17:77304030-77333563 29533 64 4 999 34 5 57 358 SEPT9
SE_02_137300069 chr17:7833977-7845412 11435 69 6 286 15 1 300 253 KDM6B,CYB5D1,CHD3,TMEM88,NAA38
SE_02_137300176 chr17:81340616-81346021 5405 176 1 145 8 0 70 0 LINC00482,LOC100130370,TMEM105,SLC38A10
SE_02_137300070 chr17:81387052-81406275 19223 70 12 633 43 1 318 274 BAHCC1,MIR4740,LOC100130370,MIR3186
SE_02_137300095 chr17:909805-956083 46278 95 27 1876 131 7 101 0 NXN,TIMM22
SE_02_137300205 chr18:23099566-23116793 17227 205 9 481 28 1 12 0 CABLES1
SE_02_137300168 chr18:3451001-3459733 8732 168 2 249 8 1 75 670 TGIF1,GAPLINC
SE_02_137300026 chr18:3594450-3626554 32104 26 11 845 52 5 53 686 DLGAP1,DLGAP1-AS2,DLGAP1-AS1
SE_02_137300132 chr18:3649061-3666352 17291 132 7 524 27 3 40 26 DLGAP1,DLGAP1-AS2
SE_02_137300067 chr18:77088025-77131034 43009 67 22 1336 45 4 35 41 MBP
SE_02_137300204 chr19:11090450-11096106 5656 204 3 171 2 6 3 160 LDLR,MIR6886
SE_02_137300109 chr19:1161652-1184415 22763 109 17 798 44 0 48 158 SBNO2,STK11
SE_02_137300156 chr19:12778156-12794381 16225 156 7 371 29 0 300 517 JUNB,MIR5684,BEST2,RTBDN,ASNA1,HOOK2,RNASEH2A,PRDX2,C19ORF43,MAST1
SE_02_137300106 chr19:13009602-13037277 27675 106 12 600 16 0 406 331 NFIX,DAND5
SE_02_137300184 chr19:13151953-13168407 16454 184 10 433 33 1 94 519 IER2,STX10,LYL1,TRMT1,NACC1
SE_02_137300203 chr19:13838031-13842848 4817 203 1 151 10 1 64 0 NANOS3,LOC284454,MIR23A,ZSWIM4,MIR27A,MIR24-2,MIR181D,MIR181C
SE_02_137300055 chr19:13845763-13854006 8243 55 1 215 19 0 69 0 NANOS3,LOC284454,MIR23A,MIR27A,MIR24-2,MIR181D,MIR181C
SE_02_137300002 chr19:38647687-38706402 58715 2 19 1678 203 7 276 450 ACTN4,EIF3K,CAPN12,MAP4K1
SE_02_137300025 chr19:38835064-38850023 14959 25 7 548 44 0 215 1377 HNRNPL,ECH1,NFKBIB,LGALS7B,SIRT2,RINL,LGALS4
SE_02_137300182 chr19:39073142-39079888 6746 182 2 238 16 0 0 0 PAPL,FBXO27,PAK4
SE_02_137300007 chr19:39400985-39404885 3900 7 1 80 6 0 55 0 ZFP36,PLEKHG2,SUPT5H,RPS16,PAF1,MED29,MIR4530
SE_02_137300008 chr19:39406842-39412284 5442 8 1 143 3 0 103 662 ZFP36,MIR4530,PLEKHG2,SUPT5H,RPS16,PAF1,MED29
SE_02_137300001 chr19:39427726-39436010 8284 1 1 292 26 0 40 399 RPS16,PLEKHG2,TIMM50,ZFP36,SUPT5H,MED29,PAF1,MIR4530
SE_02_137300139 chr19:54001628-54024869 23241 139 18 741 80 1 14 226 CACNG6,VSTM1,MIR935,CACNG8
SE_02_137300222 chr19:55206551-55217952 11401 222 3 393 23 0 14 305 PTPRH,SYT5,TMEM86B,TNNI3,MIR6804,MIR6802,DNAAF3,MIR6803,PPP6R1
SE_02_137300124 chr2:101106404-101129658 23254 124 16 647 74 1 28 0 TBC1D8
SE_02_137300022 chr2:105370307-105410568 40261 22 27 1147 92 2 98 850 FHL2,TGFBRAP1,C2ORF49
SE_02_137300194 chr2:110100096-110114755 14659 194 9 368 26 0 18 0 MALL,MIR4267,MIR4436B1
SE_02_137300092 chr2:173075316-173093120 17804 92 8 448 39 2 86 236 ZAK
SE_02_137300164 chr2:177239456-177254132 14676 164 10 357 10 0 19 0 NFE2L2,MIR4444-1,HNRNPA3,MIR3128
SE_02_137300198 chr2:200373206-200383878 10672 198 8 254 21 3 51 0 SPATS2L
SE_02_137300163 chr2:200397007-200410679 13672 163 7 327 14 0 54 0 SPATS2L
SE_02_137300218 chr2:231604069-231615126 11057 218 5 285 36 0 84 0 C2ORF57,NMUR1
SE_02_137300138 chr2:233413050-233429821 16771 138 15 473 30 11 19 81 DGKD
SE_02_137300104 chr2:234241235-234259822 18587 104 15 489 6 0 20 0 SPP2
SE_02_137300085 chr2:234952068-234984183 32115 85 23 1004 6 1 89 194 SH3BP4
SE_02_137300093 chr2:36364535-36412565 48030 93 24 1612 113 7 195 45 CRIM1,LOC100288911
SE_02_137300143 chr2:36555063-36573289 18226 143 15 621 42 2 25 94 FEZ2
SE_02_137300199 chr2:54951946-54957795 5849 199 3 219 35 3 19 200 EML6,RTN4
SE_02_137300043 chr2:9227114-9264029 36915 43 27 1035 80 1 102 0 ASAP2
SE_02_137300087 chr20:17556880-17572304 15424 87 5 429 16 1 69 487 DSTN,BFSP1
SE_02_137300066 chr20:31587483-31605168 17685 66 8 482 51 2 69 16 COX4I2,MCTS2P,ID1,MIR3193,HM13-AS1
SE_02_137300090 chr20:35303010-35321068 18058 90 13 392 35 11 0 734 UQCC1,EIF6,FAM83C-AS1,MMP24-AS1,FAM83C
SE_02_137300040 chr20:47315710-47361189 45479 40 17 1209 6 3 183 1228 ZMYND8,LOC100131496
SE_02_137300046 chr20:50724615-50771851 47236 46 19 1317 117 3 143 595 PARD6B,BCAS4,FAM65C
SE_02_137300028 chr20:53578522-53624455 45933 28 18 1120 8 1 169 456 ZNF217,LOC101927770
SE_02_137300027 chr20:53735261-53791277 56016 27 19 1640 5 7 53 0 SUMO1P1
SE_02_137300232 chr20:53827365-53830772 3407 232 1 92 2 1 0 0 SUMO1P1
SE_02_137300118 chr20:53893382-53942688 49306 118 17 1338 24 5 70 0 SUMO1P1
SE_02_137300185 chr20:62914181-62929324 15143 185 5 470 45 4 14 174 DIDO1,GID8,SLC17A9
SE_02_137300075 chr21:38786412-38824258 37846 75 24 1088 76 5 118 1024 ETS2,LINC00114,LOC101928398
SE_02_137300151 chr21:41751515-41769311 17796 151 20 575 50 5 77 287 RIPK4,MIR6814,LINC00479,LINC00112
SE_02_137300147 chr21:45406528-45439816 33288 147 21 1346 131 1 32 1415 COL18A1,COL18A1-AS1,COL18A1-AS2,MIR6815
SE_02_137300021 chr22:30194690-30258606 63916 21 22 1774 153 15 399 1238 LIF,OSM,GATSL3
SE_02_137300111 chr22:36350090-36378959 28869 111 27 857 58 2 50 81 MYH9
SE_02_137300018 chr22:46055761-46089432 33671 18 9 997 44 3 232 529 MIRLET7BHG,PRR34-AS1,PRR34,MIR3619,LINC00899,LOC730668,MIRLET7A3,MIR4763,MIRLET7B
SE_02_137300214 chr3:10190955-10206967 16012 214 15 503 46 0 13 88 IRAK2,TATDN2,VHL
SE_02_137300058 chr3:11590987-11644149 53162 58 21 1592 174 13 125 318 VGLL4
SE_02_137300014 chr3:149362232-149402151 39919 14 14 1103 84 5 112 464 TM4SF1-AS1,TM4SF1,TM4SF18
SE_02_137300009 chr3:149529042-149658010 128968 9 70 3408 117 13 299 389 WWTR1,WWTR1-AS1
SE_02_137300126 chr3:171776163-171812549 36386 126 12 964 124 9 55 164 PLD1,TMEM212
SE_02_137300061 chr3:172128114-172156734 28620 61 15 744 4 3 100 33 FNDC3B
SE_02_137300161 chr3:177344437-177360452 16015 161 4 437 11 0 77 0 LINC00501
SE_02_137300057 chr3:194133085-194142550 9465 57 5 198 4 1 260 492 HES1
SE_02_137300082 chr3:4976510-4996203 19693 82 11 544 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_137300128 chr3:58025310-58059936 34626 128 16 952 66 8 65 0 FLNB
SE_02_137300112 chr4:140081296-140099922 18626 112 16 499 10 2 91 0 MAML3
SE_02_137300119 chr4:186675864-186703026 27162 119 30 796 12 0 66 0 FAT1
SE_02_137300053 chr4:7869113-7935893 66780 53 44 2506 280 5 68 30 AFAP1,LOC389199
SE_02_137300190 chr5:139650949-139674129 23180 190 17 520 21 1 301 0 CXXC5
SE_02_137300136 chr5:14034632-14040652 6020 136 3 231 10 1 34 0 DNAH5
SE_02_137300216 chr5:14104552-14109791 5239 216 3 153 4 4 7 0 TRIO
SE_02_137300004 chr5:14143760-14271481 127721 4 84 3478 138 11 265 182 TRIO
SE_02_137300150 chr5:142356055-142364932 8877 150 4 257 24 0 37 0 LOC101926941,SPRY4,SPRY4-IT1
SE_02_137300202 chr5:149484506-149490170 5664 202 5 150 8 1 7 0 MIR145
SE_02_137300034 chr5:172757923-172807927 50004 34 17 1538 72 5 219 574 LOC101928093,DUSP1,ERGIC1
SE_02_137300083 chr5:179818039-179837116 19077 83 8 737 87 3 79 936 SQSTM1,LTC4S,MGAT4B,C5ORF45,MIR1229
SE_02_137300103 chr5:43033359-43044612 11253 103 5 282 20 0 0 570 ANXA2R,LOC153684,LOC648987,LOC100506639,FLJ32255,LOC100132356
SE_02_137300221 chr5:43063574-43067966 4392 221 1 110 9 0 0 435 LOC100506639,LOC100132356,LOC648987,LOC153684,ANXA2R
SE_02_137300152 chr5:76789637-76821458 31821 152 11 951 85 2 44 156 F2RL1,S100Z
SE_02_137300213 chr6:10383149-10410906 27757 213 16 667 29 3 484 871 TFAP2A,MIR5689,LINC00518,TFAP2A-AS1
SE_02_137300098 chr6:10519263-10532392 13129 98 6 448 26 3 30 344 GCNT2
SE_02_137300210 chr6:149847246-149861501 14255 210 10 360 46 0 13 46 LRP11,RAET1E-AS1,RAET1E
SE_02_137300208 chr6:151035830-151046365 10535 208 9 342 12 1 48 58 MTHFD1L
SE_02_137300219 chr6:165571511-165585751 14240 219 6 413 0 0 15 42 PDE10A
SE_02_137300130 chr6:16699002-16729643 30641 130 17 803 38 5 21 0 ATXN1
SE_02_137300160 chr6:26047660-26066490 18830 160 3 562 45 8 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A
SE_02_137300110 chr6:26118532-26128380 9848 110 7 341 49 15 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C
SE_02_137300105 chr6:34223587-34247225 23638 105 7 757 36 5 181 1333 MIR6835,HMGA1,C6ORF1
SE_02_137300097 chr6:42215033-42230940 15907 97 13 463 73 6 43 506 MRPS10,TRERF1,GUCA1B
SE_02_137300062 chr6:73515171-73524272 9101 62 5 302 28 3 107 658 EEF1A1
SE_02_137300073 chr7:101114728-101140109 25381 73 10 765 96 6 92 1538 SERPINE1,MIR4653,VGF,AP1S1,NAT16,TRIM56
SE_02_137300071 chr7:105010311-105015972 5661 71 2 175 5 0 94 724 KMT2E,KMT2E-AS1,LINC01004
SE_02_137300228 chr7:116353400-116358499 5099 228 1 137 9 0 55 46 LOC102724434
SE_02_137300050 chr7:116499691-116544947 45256 50 17 1147 147 10 212 916 CAV1,CAV2
SE_02_137300010 chr7:130880718-130945901 65183 10 27 1815 124 12 206 516 LINC-PINT,LOC100506860,MIR29A,MIR29B1
SE_02_137300078 chr7:1506748-1544843 38095 78 9 1518 152 2 82 2401 TMEM184A,MAFK,PSMG3,MICALL2,PSMG3-AS1,INTS1
SE_02_137300145 chr7:158813675-158824283 10608 145 9 310 33 1 12 105 ESYT2,WDR60
SE_02_137300122 chr7:23467435-23475691 8256 122 5 178 10 0 108 262 IGF2BP3,RPS2P32
SE_02_137300125 chr7:26152892-26159644 6752 125 2 178 6 0 22 81 NFE2L3,HNRNPA2B1,CBX3
SE_02_137300155 chr7:26187013-26200746 13733 155 5 640 25 0 165 568 HNRNPA2B1,NFE2L3,CBX3
SE_02_137300074 chr7:2801417-2826300 24883 74 19 917 69 1 48 175 GNA12
SE_02_137300159 chr7:36387250-36394073 6823 159 3 162 17 1 16 152 ANLN,KIAA0895
SE_02_137300024 chr7:47513823-47605396 91573 24 32 2734 91 4 162 277 TNS3,LINC01447,C7ORF65
SE_02_137300193 chr7:47782913-47788127 5214 193 4 128 5 0 17 0 PKD1L1,C7ORF69,LINC00525
SE_02_137300134 chr7:5417673-5430028 12355 134 9 371 3 0 249 846 TNRC18
SE_02_137300079 chr7:55063531-55086884 23353 79 14 644 45 6 64 0 EGFR
SE_02_137300108 chr7:55127820-55134881 7061 108 2 215 5 0 15 0 EGFR,EGFR-AS1
SE_02_137300195 chr8:102804622-102810781 6159 195 4 140 14 0 60 670 AZIN1
SE_02_137300011 chr8:127793933-127932576 138643 11 67 4017 88 12 210 412 PVT1,MIR1204,MIR1205,TMEM75
SE_02_137300077 chr8:143933660-143957629 23969 77 11 817 74 2 253 2215 PLEC,MIR661,PARP10,GRINA
SE_02_137300120 chr8:66112688-66125941 13253 120 5 388 41 0 12 175 TRIM55
SE_02_137300081 chr8:66512545-66565785 53240 81 15 1436 52 2 176 553 C8ORF46,MYBL1
SE_02_137300096 chr9:127954106-128027362 73256 96 24 2122 276 5 0 253 FAM102A,ST6GALNAC4,PIP5KL1,ST6GALNAC6,SLC25A25,NAIF1,DPM2
SE_02_137300169 chr9:129459266-129497250 37984 169 12 1123 71 0 122 419 LINC00963
SE_02_137300102 chr9:38007836-38064345 56509 102 27 1717 121 14 176 93 SHB
SE_02_137300223 chrX:45757996-45776140 18144 223 14 314 5 0 118 0 MIR222,MIR221,LOC392452

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM4781017
Input ID: Name:GSM4781018
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb