About Enhancer

Enhancer ID: E_01_0295
Species: human
Position : chr4:73737463-73739463
Biosample name:
Experiment class : High+Lowthroughput
Enhancer type: Enhancer
Disease: Acute kidney injury
Pubmed ID:  30688289
Enhancer experiment: PCR, Western blots, sequencing technology
Enhancer experiment description: Quantitative real-time polymerase chain reaction (qRT-PCR) and Western blot were performed to determine the expressions of inflammatory cytokines including interleukin (IL)-1?, IL-6, tumor necrosis factor-? (TNF-?), apoptosis-related genes, and the downstream target genes of NF-?B signaling pathway, including NFKBIA, CXCL8, and cyclin D1.

About Target gene

Target gene : --
Strong evidence: qRT-PCR,qPCR,ChIP,3C
Less strong evidence: RNA-Seq
Target gene experiment description: Quantitative real-time polymerase chain reaction (qRT-PCR) and Western blot were performed to determine the expressions of inflammatory cytokines including interleukin (IL)-1?, IL-6, tumor necrosis factor-? (TNF-?), apoptosis-related genes, and the downstream target genes of NF-?B signaling pathway, including NFKBIA, CXCL8, and cyclin D1.

About TF

TF name : CXCL8
TF experiment: PCR?Western blots,????
TF experiment description: Quantitative real-time polymerase chain reaction (qRT-PCR) and Western blot were performed to determine the expressions of inflammatory cytokines including interleukin (IL)-1?, IL-6, tumor necrosis factor-? (TNF-?), apoptosis-related genes, and the downstream target genes of NF-?B signaling pathway, including NFKBIA, CXCL8, and cyclin D1.

About Function

Enhancer function : Quantitative real-time polymerase chain reaction (qRT-PCR) and Western blot were performed to determine the expressions of inflammatory cytokines including interleukin (IL)-1?, IL-6, tumor necrosis factor-? (TNF-?), apoptosis-related genes, and the downstream target genes of NF-?B signaling pathway, including NFKBIA, CXCL8, and cyclin D1.
Enhancer function experiment: Immunohistochemical staining
Enhancer function
experiment description:
Quantitative real-time polymerase chain reaction (qRT-PCR) and Western blot were performed to determine the expressions of inflammatory cytokines including interleukin (IL)-1?, IL-6, tumor necrosis factor-? (TNF-?), apoptosis-related genes, and the downstream target genes of NF-?B signaling pathway, including NFKBIA, CXCL8, and cyclin D1.

About SNP

SNP ID: --

Upstream Pathway Annotation of TF

GeneName Pathway Name Source Gene Number
CXCL8 AP-1 transcription factor network pid 71
CXCL8 ATF-2 transcription factor network pid 59
CXCL8 ATF4 activates genes reactome 25
CXCL8 Calcineurin-regulated NFAT-dependent transcription in lymphocytes pid 50
CXCL8 Chemokine receptors bind chemokines reactome 57
CXCL8 G alpha (i) signalling events reactome 241
CXCL8 Glucocorticoid receptor regulatory network pid 85
CXCL8 Heterotrimeric GPCR signaling pathway (through G alpha i and pertussis toxin) ( GPCR signaling (pertussis toxin) ) inoh 228
CXCL8 Heterotrimeric GPCR signaling pathway (through G alpha q, PLC beta and ERK cascade) ( GPCR signaling (G alpha q) ) inoh 239
CXCL8 Heterotrimeric GPCR signaling pathway (through G alpha s ACs Epac BRaf and ERKcascade) ( GPCR signaling (G alpha s, Epac and ERK) ) inoh 237
CXCL8 Heterotrimeric GPCR signaling pathway (through_G alpha s_ACs_PKA_BRaf_and_ERKcascade)(canonical) ( GPCR signaling (G alpha s, PKA and ERK) ) inoh 227
CXCL8 Heterotrimeric GTP-binding protein coupled receptor signaling pathway (through G alpha i, adenylate cyclase and cAMP) ( GPCR signaling (G alpha i) ) inoh 228
CXCL8 Heterotrimeric GTP-binding protein coupled receptor signaling pathway (through_G_alpha_s,_cholera_toxin,_adenylate_cyclase_and_cAMP) ( GPCR signaling (cholera toxin) ) inoh 227
CXCL8 IL8- and CXCR1-mediated signaling events pid 29
CXCL8 IL8- and CXCR2-mediated signaling events pid 35
CXCL8 Inflammation mediated by chemokine and cytokine signaling pathway panther 189
CXCL8 Interleukin signaling pathway panther 86
CXCL8 JAK-STAT pathway and regulation pathway ( JAK-STAT pathway and regulation pathway Diagram ) inoh 97
CXCL8 LPA receptor mediated events pid 65
CXCL8 Peptide ligand-binding receptors reactome 103
CXCL8 Regulation of nuclear beta catenin signaling and target gene transcription pid 80
CXCL8 Senescence-Associated Secretory Phenotype (SASP) reactome 108
CXCL8 Syndecan-2-mediated signaling events pid 38
CXCL8 Syndecan-3-mediated signaling events pid 23
CXCL8 Validated transcriptional targets of AP1 family members Fra1 and Fra2 pid 37
CXCL8 Hs_Hepatitis_C_and_Hepatocellular_Carcinoma_WP3646_88640 wikipathways 36
CXCL8 Hs_Senescence_and_Autophagy_in_Cancer_WP615_81193 wikipathways 62

Enhancer associated network

The number on yellow line represents the distance between enhancer and target gene

Expression of target genes for the enhancer


Enhancer associated SNPs