About Enhancer

Enhancer ID: E_01_0944
Species: human
Position : chr2:135784821-135786821
Biosample name:
Experiment class : High+Lowthroughput
Enhancer type: Enhancer
Disease: Lactose intolerance
Pubmed ID:  32659776
Enhancer experiment: PCR
Enhancer experiment description: Polymorphisms in the enhancer of the lactase gene (LCT) are strongly associated with lactase per_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x0002_sistence, but not always predictive of the phenotype.

About Target gene

Target gene : LCT(LAC,LPH,LPH1)
Strong evidence: qRT-PCR,qPCR,ChIP,3C
Less strong evidence: RNA-Seq
Target gene experiment description: Polymorphisms in the enhancer of the lactase gene (LCT) are strongly associated with lactase per_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x0002_sistence, but not always predictive of the phenotype.

About TF

TF name : --
TF experiment: PCR
TF experiment description: Polymorphisms in the enhancer of the lactase gene (LCT) are strongly associated with lactase per_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x0002_sistence, but not always predictive of the phenotype.

About Function

Enhancer function : Polymorphisms in the enhancer of the lactase gene (LCT) are strongly associated with lactase per_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x0002_sistence, but not always predictive of the phenotype.
Enhancer function experiment: Immunohistochemical staining
Enhancer function
experiment description:
Polymorphisms in the enhancer of the lactase gene (LCT) are strongly associated with lactase per_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x005f_x0002_sistence, but not always predictive of the phenotype.

About SNP


Upstream Pathway Annotation of TF

GeneName Pathway Name Source Gene Number

Enhancer associated network

The number on yellow line represents the distance between enhancer and target gene

Expression of target genes for the enhancer


Enhancer associated SNPs