About Enhancer

Enhancer ID: E_02_0249
Species: human
Position : chr13:30454192-30456192
Biosample name:
Experiment class : High+Lowthroughput
Enhancer type: Enhancer
Disease: Renal impairment
Pubmed ID:  30651760
Enhancer experiment: PCR, sequencing technology
Enhancer experiment description: The results of the RT-qPCR demonstrated that hypoxia stimulation increased the expression of HMGB1, PPAR, RAGE and TNF-? mRNA, and decreased the expression of SIRT1 mRNA in kidney tissues (P<0.05).

About Target gene

Target gene : HMGB1
Strong evidence: qRT-PCR,qPCR,ChIP,3C
Less strong evidence: RNA-Seq
Target gene experiment description: The results of the RT-qPCR demonstrated that hypoxia stimulation increased the expression of HMGB1, PPAR, RAGE and TNF-? mRNA, and decreased the expression of SIRT1 mRNA in kidney tissues (P<0.05).

About TF

TF name : --
TF experiment: PCR?????
TF experiment description: The results of the RT-qPCR demonstrated that hypoxia stimulation increased the expression of HMGB1, PPAR, RAGE and TNF-? mRNA, and decreased the expression of SIRT1 mRNA in kidney tissues (P<0.05).

About Function

Enhancer function : The results of the RT-qPCR demonstrated that hypoxia stimulation increased the expression of HMGB1, PPAR, RAGE and TNF-? mRNA, and decreased the expression of SIRT1 mRNA in kidney tissues (P<0.05).
Enhancer function experiment: Immunohistochemical staining
Enhancer function
experiment description:
The results of the RT-qPCR demonstrated that hypoxia stimulation increased the expression of HMGB1, PPAR, RAGE and TNF-? mRNA, and decreased the expression of SIRT1 mRNA in kidney tissues (P<0.05).

About SNP

SNP ID: --

Upstream Pathway Annotation of TF

GeneName Pathway Name Source Gene Number

Enhancer associated network

The number on yellow line represents the distance between enhancer and target gene

Expression of target genes for the enhancer


Enhancer associated SNPs