About Enhancer
| Enhancer ID: |
E_02_0656 |
| Species: |
human |
| Position :
|
chr16:67559225-67561225
  |
| Biosample name: |
|
| Experiment class :
|
High+Lowthroughput |
| Enhancer type: |
Enhancer |
| Disease: |
Breast cancer (breast cancer) |
| Pubmed ID: |
31373033
|
| Enhancer experiment: |
Western blot, PCR, gel electrophoresis, chip SEQ, RNA seq |
| Enhancer experiment description: |
Genome-wide studies have shown that the architectural proteins CTCF and its frequent associated partner cohesin are important for partition of the genome into largely conserved topologically associating domains or TADs on the mega_x005f_x0002_base. |
About Target gene
| Target gene : |
CTCF |
| Strong evidence: |
qRT-PCR,qPCR,ChIP,3C |
| Less strong evidence: |
RNA-Seq |
| Target gene experiment description: |
Genome-wide studies have shown that the architectural proteins CTCF and its frequent associated partner cohesin are important for partition of the genome into largely conserved topologically associating domains or TADs on the mega_x005f_x0002_base. |
About TF
| TF name : |
-- |
| TF experiment: |
Western blot,PCR,????,ChIP-seq,RNA-seq |
| TF experiment description: |
Genome-wide studies have shown that the architectural proteins CTCF and its frequent associated partner cohesin are important for partition of the genome into largely conserved topologically associating domains or TADs on the mega_x005f_x0002_base. |
About Function
| Enhancer function : |
Genome-wide studies have shown that the architectural proteins CTCF and its frequent associated partner cohesin are important for partition of the genome into largely conserved topologically associating domains or TADs on the mega_x005f_x0002_base. |
| Enhancer function experiment: |
Immunohistochemical staining |
Enhancer function
experiment description: |
Genome-wide studies have shown that the architectural proteins CTCF and its frequent associated partner cohesin are important for partition of the genome into largely conserved topologically associating domains or TADs on the mega_x005f_x0002_base. |
About SNP
Upstream Pathway Annotation of TF
| GeneName |
Pathway Name |
Source |
Gene Number |
Enhancer associated network
The number on yellow line represents the distance between enhancer and
target gene
Expression of target genes for the
enhancer
Enhancer associated SNPs