About Enhancer

Enhancer ID: E_02_0865
Species: mouse
Position : chr4:34888479-34889907
Biosample name:
Experiment class : Low throughput
Enhancer type: Enhancer
Disease: --
Pubmed ID:  25810254
Enhancer experiment: qPCR,ChIP,3C
Enhancer experiment description: Using quantitative PCR (qPCR) on DNase-treated reverse-transcribed RNA from a gonadotrope cell line, we amplified fragments between ?5300 and ?3872 bp upstream of the Cga TSS, which includes most of the reported enhancer.

About Target gene

Target gene : Cga(CG-alpha,FSHA,GPHA1,GPHalpha,HCG,LHA,Tsha,aGSU,alpha-GSU,alphaGSU,alphaSU),Cga(CG-alpha,FSHA,GPHA1,GPHalpha,HCG,LHA,Tsha,aGSU,alpha-GSU,alphaGSU,alphaSU),Cga(CG-alpha,FSHA,GPHA1,GPHalpha,HCG,LHA,Tsha,aGSU,alpha-GSU,alphaGSU,alphaSU),Cga(CG-alpha,FSHA,GPHA1,GPHalpha,HCG,LHA,Tsha,aGSU,alpha-GSU,alphaGSU,alphaSU),Cga(CG-alpha,FSHA,GPHA1,GPHalpha,HCG,LHA,Tsha,aGSU,alpha-GSU,alphaGSU,alphaSU),Cga(CG-alpha,FSHA,GPHA1,GPHalpha,HCG,LHA,Tsha,aGSU,alpha-GSU,alphaGSU,alphaSU)
Strong evidence: 3C
Less strong evidence: qPCR,ChIP
Target gene experiment description: qPCR analysis confirmed the interaction of the distal enhancer regions (?6.7 to ?6.58 and ?4.9 to ?4.85 kbp) with the proximal Cga promoter in both the treated and untreated cells and,with greater frequency, in WT and eRNA-knockdown cells after normalization to the relative levels of the Fsh? chimeric fragment;qPCR analysis confirmed the interaction of the distal enhancer regions (?6.7 to ?6.58 and ?4.9 to ?4.85 kbp) with the proximal Cga promoter in both the treated and untreated cells and,with greater frequency, in WT and eRNA-knockdown cells after normalization to the relative levels of the Fsh? chimeric fragment;qPCR analysis confirmed the interaction of the distal enhancer regions (?6.7 to ?6.58 and ?4.9 to ?4.85 kbp) with the proximal Cga promoter in both the treated and untreated cells and,with greater frequency, in WT and eRNA-knockdown cells after normalization to the relative levels of the Fsh? chimeric fragment;qPCR analysis confirmed the interaction of the distal enhancer regions (?6.7 to ?6.58 and ?4.9 to ?4.85 kbp) with the proximal Cga promoter in both the treated and untreated cells and,with greater frequency, in WT and eRNA-knockdown cells after normalization to the relative levels of the Fsh? chimeric fragment;qPCR analysis confirmed the interaction of the distal enhancer regions (?6.7 to ?6.58 and ?4.9 to ?4.85 kbp) with the proximal Cga promoter in both the treated and untreated cells and,with greater frequency, in WT and eRNA-knockdown cells after normalization to the relative levels of the Fsh? chimeric fragment;qPCR analysis confirmed the interaction of the distal enhancer regions (?6.7 to ?6.58 and ?4.9 to ?4.85 kbp) with the proximal Cga promoter in both the treated and untreated cells and,with greater frequency, in WT and eRNA-knockdown cells after normalization to the relative levels of the Fsh? chimeric fragment

About TF

TF name : ------------
TF experiment: --
TF experiment description: --;--;--;--;--;--

About Function

Enhancer function : --
Enhancer function experiment: --
Enhancer function
experiment description:
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About SNP

SNP ID: --

Upstream Pathway Annotation of TF

GeneName Pathway Name Source Gene Number

Enhancer associated network

The number on yellow line represents the distance between enhancer and target gene

Expression of target genes for the enhancer


Enhancer associated SNPs