Gene Overview
| Target Gene: | Ddx3y |
| NCBI Official Symbol: | Ddx3y |
| Entrez ID: | 26900 |
| Ensembl ID: | ENSMUSG00000069045 |
| Gene Full Name: | DEAD box helicase 3, Y-linked |
| Strand: | - |
| Gene Locus: | Y|Ypter |
| External Links: |
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Ddx3y Significantly Regulated by These T(co)Fs
T(co)Fs
that Activate Ddx3y
T(co)Fs
that Repress Ddx3y
The Intensity of the Gene Regulated by T(co)Fs:
Ddx3y-T(co)F Pairs
| Target Gene |
T(co)F | Knock -Method |
Tissue Type | Biosample Name |
Fold Change |
Log2FC | P-value | Corrected _P |
Dataset ID |
|---|---|---|---|---|---|---|---|---|---|
| Ddx3y | Adnp | knockout | Embryo | Whole embryonic body | 24.0309 | 4.58682 | 0.0159593613184546 | 0.332265744510253 | DataSet_11_001 |
| Ddx3y | Atoh1 | knockout | Gastrointestinal_tissue | Intestinal epithelial Lgr5(hi) stem cells | 0.178461 | -2.48632 | 0.225102288263808 | 0.336725269992797 | DataSet_11_010 |
| Ddx3y | Bcl6 | knockout | Bone_marrow | Myeloid cells | 86.1034 | 6.428 | 5.7080670635279e-16 | 1.18391018964632e-11 | DataSet_11_015 |
| Ddx3y | Bhlha9 | knockout | Limb | Whole limb bud | 0.494651 | -1.01552 | - | - | DataSet_11_016 |
| Ddx3y | Cebpb | knockout | Bone_marrow | Bone marrow-derived macrophages | 3.48886 | 1.80276 | - | - | DataSet_11_021 |
| Ddx3y | Dmrt1 | knockout | Testis | Juvenile testes | 1.52145 | 0.605446 | 0.112796348846102 | 0.932139260123802 | DataSet_11_026 |
| Ddx3y | E2f4 | knockout | Brain | Forebrain | 1.65644 | 0.728087 | - | - | DataSet_11_033 |
| Ddx3y | Gata5 | knockout | Lung | Left lung | 2.60268 | 1.38 | 0.355385260655237 | 0.515818452851664 | DataSet_11_051 |
| Ddx3y | Gfi1 | knockout | Cord_Blood | T-cells | 5.91346 | 2.564 | 0.000673441487716745 | 0.0696584357889868 | DataSet_11_053 |
| Ddx3y | Irf6 | knockout | Skin | Skin | 3.32313 | 1.73254 | 0.0573392647431245 | 0.298159244871217 | DataSet_11_062 |
| Ddx3y | Jarid2 | knockout | Pancreas | Embryonic pancreas | 0.0263254 | -5.2474 | 0.0528569485740677 | 0.748060478615153 | DataSet_11_064 |
| Ddx3y | Lmx1b | knockout | Limb | Proximal limb | 0.230476 | -2.11731 | 0.0544467132541401 | 0.508497847662197 | DataSet_11_071 |
| Ddx3y | Lmx1b | knockout | Kidney | Kidney | 3.0634 | 1.61513 | 0.276435281678449 | 0.615477956363516 | DataSet_11_072 |
| Ddx3y | Mafg | knockout | Embryo | Whole embryo | 2.35287 | 1.23442 | 3.44419596432806e-07 | 0.000276016051210731 | DataSet_11_073 |
| Ddx3y | Mbd1 | siRNA | Adipose_tissue | 3T3-L1 cells | 0.646667 | -0.628906 | - | - | DataSet_11_074 |
| Ddx3y | Mbd2 | knockout | Lymph | GFP+ BM leukemia cells | 44.2899 | 5.46891 | 1.29824355997967e-10 | 2.21915267025558e-07 | DataSet_11_076 |
| Ddx3y | Myb | shRNA | Hematopoietic | AML cells | 3.33662 | 1.73839 | 0.0109079000019041 | 0.0634616420587636 | DataSet_11_084 |
| Ddx3y | Neurod1 | knockout | Eye | Pineal gland | 2.46777 | 1.30321 | 0.682861565953914 | 0.9983937273602 | DataSet_11_089 |
| Ddx3y | Nhlh2 | knockout | Eye | Retina | 0.508249 | -0.976392 | 0.152079274057247 | 0.523726874680013 | DataSet_11_092 |
| Ddx3y | Nr2f2 | knockout | Ovary | E14.5 Ovary | 1.61001 | 0.687069 | 0.339810342385867 | 0.871738566657422 | DataSet_11_094 |
| Ddx3y | Otx2 | knockout | Eye | Retina | 0.443237 | -1.17385 | 0.147620076504828 | 0.999923528647439 | DataSet_11_097 |
| Ddx3y | p63 | siRNA | Skin | Primary keratinocytes | 0.655671 | -0.608957 | 0.0820464475147439 | 0.214333804461747 | DataSet_11_099 |
| Ddx3y | Pax5 | knockout | Bone_marrow | B220+ cells | 0.0836853 | -3.57888 | 0.0983468005487675 | 0.488694535261616 | DataSet_11_100 |
| Ddx3y | Pitx2 | knockout | Eye | Cornea | 2.3633 | 1.2408 | 0.659447972833314 | 0.88226955373315 | DataSet_11_103 |
| Ddx3y | Prdm1 | knockout | Intestine | Mid-intestine | 1.80109 | 0.84887 | 9.4168413826615e-05 | 0.000485857533752353 | DataSet_11_106 |
| Ddx3y | Prox1 | knockout | Liver | Liver | 95.4025 | 6.57596 | - | - | DataSet_11_109 |
| Ddx3y | Rest | knockout | Brain | Brain | 1.93993 | 0.956003 | 0.0710452907232559 | 1 | DataSet_11_113 |
| Ddx3y | Runx1 | knockout | Embryo | Embryo | 1.69372 | 0.760192 | 0.569119764058858 | 0.999961610631375 | DataSet_11_114 |
| Ddx3y | Runx1 | knockout | Bone_marrow | KSL cells | 1.63417 | 0.708562 | 0.0696876280599784 | 0.8263948438845 | DataSet_11_115 |
| Ddx3y | Runx1 | knockout | Lymph | ProB cells | 1.76596 | 0.820454 | 0.161669830157128 | 0.464545005379831 | DataSet_11_116 |
| Ddx3y | Shox2 | knockout | Muscle | Embryonic forelimb | 4.62076 | 2.20813 | 1.45190494307781e-05 | 0.0725807281044597 | DataSet_11_125 |
| Ddx3y | Smad1 | knockout | Lung | Lung left lobe | 0.417045 | -1.26172 | 0.091971379271466 | 0.542998753027287 | DataSet_11_126 |
| Ddx3y | Smad4 | siRNA | Brain | bEnd3 | 0.00523508 | -7.57757 | - | - | DataSet_11_127 |
| Ddx3y | Sox11 | knockout | Eye | Retina | 0.00490253 | -7.67226 | - | - | DataSet_11_137 |
| Ddx3y | Sox11 | knockout | Brain | Cortex | 69.6166 | 6.12136 | - | - | DataSet_11_138 |
| Ddx3y | Spdef | knockout | Colon | Colon | 0.65089 | -0.619514 | 0.212503506179385 | 0.997507742354799 | DataSet_11_146 |
| Ddx3y | Stat3 | knockout | Lung | Lung typeII cells | 1.87037 | 0.90332 | 0.799352208401788 | 0.956347118477666 | DataSet_11_151 |
| Ddx3y | Stat4 | knockout | Lymph | Lamina propria lymphocytes | 0.394095 | -1.34339 | 0.076153781224832 | 0.836197475847353 | DataSet_11_152 |
| Ddx3y | Tbx1 | knockout | Ear | Otic vesicles | 2.21324 | 1.14616 | 0.234641697015498 | 0.996209135879357 | DataSet_11_154 |
| Ddx3y | Tet2 | shRNA | Embryo | ES cells | 6.79646 | 2.76478 | - | - | DataSet_11_161 |
| Ddx3y | Thap1 | knockout | Brain | Cerebellum | 1.93514 | 0.952435 | 0.103030940611932 | 0.280739946449355 | DataSet_11_164 |
| Ddx3y | Thap1 | knockout | Brain | Cortex | 1.55662 | 0.638421 | 0.140799954179506 | 0.503412622283475 | DataSet_11_165 |
| Ddx3y | Thap11 | knockout | Heart | Heart | 1.65837 | 0.729769 | 0.103212889995138 | 0.999994817864919 | DataSet_11_167 |
| Ddx3y | Vax2 | knockout | Eye | Whole eye | 1.55077 | 0.632982 | 0.460868642211009 | 0.999998533525589 | DataSet_11_173 |
| Ddx3y | Vdr | knockout | Skin | Skin | 0.435735 | -1.19848 | - | - | DataSet_11_177 |
| Ddx3y | Cpeb1 | siRNA | Neuron | Neuro-2a | 2.19866 | 1.13662 | - | - | DataSet_11_189 |
| Ddx3y | Mapk9 | knockout | Hip | Mouse Hip Cartilage | 1.83436 | 0.875277 | 4.244095e-02 | 9.126091e-02 | DataSet_11_236 |
| Ddx3y | Tet1 | knockout | Embryo | ES cells | 0.2517 | -1.99022 | 2.325464e-03 | 0.13801608 | DataSet_11_216 |
| Ddx3y | Dnmt1 | knockout | Embryo | Embryonic fibroblasts | 20.0732 | 4.3272 | 5.118408e-05 | 2.126910e-03 | DataSet_11_192 |
| Ddx3y | Ezh2 | knockout | Bone_marrow | CD45.2+LSK cells | 10.2394 | 3.35605 | - | - | DataSet_11_220 |
| Ddx3y | Dnmt3a | siRNA | Peritoneum | peritoneal macrophages | 1.55024 | 0.632494 | - | - | DataSet_11_222 |
| Ddx3y | Smarca4 | shRNA | Embryo | ES cells | 2.02274 | 1.01631 | - | - | DataSet_11_224 |
| Ddx3y | Smarca4 | shRNA | Embryo | ES cells | 2.02274 | 1.01631 | - | - | DataSet_11_225 |
| Ddx3y | Bcl11b | knockdown | Embryo | Embryonic fibroblasts | 1.87923 | 0.910141 | - | - | DataSet_11_226 |
| Ddx3y | Crebbp | knockout | Spleen | Germinal center B cells | 5.66016 | 2.50084 | 2.017663e-01 | 0.837856935 | DataSet_11_227 |
| Ddx3y | Ncl | siRNA | Embryo | ES cells | 0.619794 | -0.690139 | 9.831177e-02 | 0.4535996393 | DataSet_11_240 |
| Ddx3y | Dnmt3a | siRNA | Embryo | iPSC | 15.0532 | 3.912 | - | - | DataSet_11_241 |
| Ddx3y | Ezh2 | knockout | Calvaria | calvaria | 0.00913901 | -6.77375 | 2.108610e-01 | 0.54966233 | DataSet_11_247 |
| Ddx3y | Dnmt1 | siRNA | Embryo | Embryo | 10 | 3.32193 | - | - | DataSet_11_248 |
| Ddx3y | Kmt2d | knockout | Skin | iBiP melanoma mouse model tumor cell | 0.00602795 | -7.37412 | 2.298276e-08 | 2.932170e-05 | DataSet_11_250 |
| Ddx3y | Eed | knockout | Brain | Forebrain | 1.98389 | 0.988331 | 1.203059e-02 | 2.916723e-01 | DataSet_11_258 |
| Ddx3y | Eed | knockout | Brain | hindbrain | 2.02283 | 1.01637 | 1.269794e-02 | 4.422059e-01 | DataSet_11_259 |
| Ddx3y | Eed | knockout | Brain | midbrain | 2.02121 | 1.01522 | 1.286841e-02 | 3.955785e-01 | DataSet_11_260 |
| Ddx3y | Eed | knockout | Spinal_cord | spinal cord | 1.98765 | 0.991061 | 1.305425e-02 | 9.999790e-01 | DataSet_11_261 |
| Ddx3y | Arhgap35 | knockout | Ventral_spinal_cord | Ventral spinal cord | 1.51051 | 0.595037 | 3.121575e-01 | 1.000000000 | DataSet_11_264 |
| Ddx3y | Nsd2 | knockout | Bone_marrow | Bone marrow immature B cells | 2.68667 | 1.42582 | 5.469746e-01 | 0.76736933 | DataSet_11_267 |
| Ddx3y | Dux | knockout | Embryo | Embryo | 0.301541 | -1.72958 | 3.350681e-01 | 5.215370e-01 | DataSet_11_269 |
| Ddx3y | Dux | knockout | Embryo | Embryo | 0.301541 | -1.72958 | 3.350680e-01 | 5.215652e-01 | DataSet_11_273 |
| Ddx3y | Lin28b | knockout | Bone_marrow | Bone marrow immature B cells | 0.562143 | -0.830991 | 4.352357e-01 | 0.9643594 | DataSet_11_274 |
| Ddx3y | Ezh2 | siRNA | Bone_marrow | Mesenchymal stem cells | 1.61654 | 0.692907 | 2.904103e-04 | 1.280056e-02 | DataSet_11_276 |
| Ddx3y | Setd2 | knockout | Kidney | primary renal tubular epithelial (RTE) cells | 0.302626 | -1.72439 | - | - | DataSet_11_285 |
| Ddx3y | Pdx1 | CRISPR | Liver | Liver | 0.625 | -0.678072 | 2.058543e-01 | 0.490365810 | DataSet_11_286 |
| Ddx3y | Irf8 | knockout | Brain | mice brain | 0.141229 | -2.82389 | 3.608068e-03 | 4.016821e-01 | DataSet_11_292 |
| Ddx3y | Ssrp1 | CRISPR | Embryo | ES cells | 0.587855 | -0.766467 | 1.034066e-02 | 0.15771835 | DataSet_11_296 |
| Ddx3y | Arid2 | knockout | Muscle | LSK | 0.00591099 | -7.40239 | 2.125498e-23 | 2.122204e-19 | DataSet_11_301 |
| Ddx3y | Dnmt1 | knockout | Skin | Keratinocytes | 3.92781 | 1.97372 | 5.568784e-01 | 0.7984302658 | DataSet_11_303 |
| Ddx3y | Myc | CRISPR | Skeletal_muscle | quiescent muscle stem cell | 4.61963 | 2.20778 | 8.159848e-01 | 0.99767296 | DataSet_11_310 |
| Ddx3y | Suz12 | knockout | Lung | Alveolar macrophage | 3.8794 | 1.95583 | 9.476201e-02 | 1.662879e-01 | DataSet_11_312 |
| Ddx3y | Satb2 | knockout | Colon | Intestine epithelium | 0.57104 | -0.808337 | 6.630387e-01 | 0.8265280004 | DataSet_11_316 |
| Ddx3y | Arid1b | knockout | Bone_marrow | bone marrow leukemia cells | 0.000146028 | -12.7415 | 5.321659e-08 | 0.0002432264 | DataSet_11_317 |
| Ddx3y | Kat7 | knockout | Thymic_lobes | Thymic epithelial cells | 1.59987 | 0.677952 | 3.338326e-02 | 1.561943e-01 | DataSet_11_320 |
| Ddx3y | Setdb1 | shRNA | Neuron | NE-4C | 2.61755 | 1.38822 | - | - | DataSet_11_323 |
| Ddx3y | Ezh2 | shRNA | Brain | SVZ derived neural stem cells | 3.77662 | 1.91709 | 4.274819e-02 | 2.256430e-01 | DataSet_11_332 |
| Ddx3y | Ezh2 | knockout | Eye | Retina | 1.88362 | 0.913511 | 2.973845e-02 | 2.570642e-01 | DataSet_11_333 |
| Ddx3y | Ezh2 | knockout | Eye | Retina | 0.11126 | -3.16799 | 0.5228740196 | 1.0000000 | DataSet_11_334 |
| Ddx3y | Dnmt1 | siRNA | Heart | embryonic cardiomyocytes | 0.642748 | -0.637674 | 3.867341e-02 | 0.083731900 | DataSet_11_340 |
| Ddx3y | Dnmt1 | knockout | Kidney | kidney Cap Mesenchyme | 0.304276 | -1.71655 | 3.541193e-01 | 6.204996e-01 | DataSet_11_344 |
Regulation Region
Expression Atlas of Ddx3y