Gene Overview
Target Gene: HOXB9
NCBI Official Symbol: HOXB9
Entrez ID: 3219
Ensembl ID: ENSG00000170689
Gene Full Name: homeobox B9
Strand: -
Gene Locus: 17q21.32
External Links:

HOXB9 Significantly Regulated by These T(co)Fs

T(co)Fs that Activate HOXB9   
T(co)Fs that Repress HOXB9
The Intensity of the Gene Regulated by T(co)Fs:
HOXB9-T(co)F Pairs
Target
Gene		 T(co)F Knock
-Method		 Tissue Type Biosample
Name		 Fold
Change		 Log2FC P-value Corrected
_P		 Dataset ID
HOXB9 ZIC2 siRNA Pancreas PANC1 5.86765 2.55278 - - DataSet_01_121
HOXB9 FOXM1 siRNA Central_nervous_system U87 0.166 -2.59074 - - DataSet_01_122
HOXB9 ZNF708 siRNA Gastrointestinal_tissue GIST-T1 1.58284 0.66251 0.00023 0.0081 DataSet_01_130
HOXB9 IKZF2 shRNA Haematopoietic_and_lymphoid_tissue JURKAT 34.4679 5.10718 1.01615e-13 2.83899e-10 DataSet_01_137
HOXB9 ELK1 siRNA Peripheral_blood CD4+ T cells 0.5287 -0.91949 0.55247 0.74856 DataSet_01_162
HOXB9 JUN siRNA Peripheral_blood CD4+ T cells 0.36072 -1.47103 0.18755 0.42715 DataSet_01_164
HOXB9 MAF siRNA Peripheral_blood CD4+ T cells 0.31639 -1.66024 0.11802 0.41848 DataSet_01_165
HOXB9 NFATC3 siRNA Peripheral_blood CD4+ T cells 0.44698 -1.16172 0.35498 0.65704 DataSet_01_166
HOXB9 STAT3 siRNA Peripheral_blood CD4+ T cells 0.35633 -1.48871 0.17069 0.99183 DataSet_01_168
HOXB9 GATA2 siRNA Prostate LNCaP 0.46011 -1.11994 5.41483e-05 0.00067 DataSet_01_193
HOXB9 CREB1 shRNA Parotid_gland H3118 MEC 1.78485 0.8358 0.24685 0.61278 DataSet_01_194
HOXB9 TP63 siRNA Immortalized_keratinocyte HaCaT RG 0.62751 -0.67229 - - DataSet_01_196
HOXB9 TP63 siRNA Immortalized_keratinocyte HaCaT RG 1.89603 0.92299 - - DataSet_01_197
HOXB9 TP63 siRNA Head_and_neck SCC-1 0.62465 -0.67888 - - DataSet_01_198
HOXB9 LIN28A siRNA Embryo H9 0.33489 -1.57825 0.00471 0.03176 DataSet_01_215
HOXB9 FOXA1 siRNA Prostate LNCaP 1.61738 0.69366 0.00227 0.09187 DataSet_01_233
HOXB9 STAT5 shRNA Haematopoietic_and_lymphoid_tissue K562 0.35661 -1.48757 2.20573e-06 0.00023 DataSet_01_239
HOXB9 GATA6 siRNA Colon HT29 0.61699 -0.69669 - - DataSet_01_247
HOXB9 TWIST1 shRNA Stomach CAF32 1.56216 0.64354 0.00415 0.03356 DataSet_01_253
HOXB9 NFYA shRNA Colon HCT1163 0.49785 -1.00621 9.9975e-05 0.00617 DataSet_01_287
HOXB9 TFAP4 siRNA Brain BE(2)-C 0.16171 -2.6285 0.29947 0.51625 DataSet_01_295
HOXB9 PTEN shRNA Mammary_gland SKBR3 2.12402 1.08679 0.01864 0.48625 DataSet_01_303
HOXB9 ELK3 shRNA Mammary_gland MDA-MB-231 3.54074 1.82405 5.78299e-06 9.02635e-05 DataSet_01_318
HOXB9 HOXC6 siRNA Prostate LNCaP 1.68495 0.75271 0.04886 0.99927 DataSet_01_333
HOXB9 HIF1A siRNA Oral_cavity OEC-M1 1.86162 0.89656 0.24188 0.85151 DataSet_01_348
HOXB9 ETV4 shRNA Prostate PC3 0.59597 -0.74669 - - DataSet_01_356
HOXB9 PAX3 shRNA Soft_tissue Rh30 2.71228 1.43951 - - DataSet_01_359
HOXB9 SOX17 siRNA Umbilical_vein HUVEC 0.39902 -1.32545 - - DataSet_01_360
HOXB9 PRPF4 shRNA Liver HepG2 0.6 -0.73697 0.82999 0.88594 DataSet_02_128
HOXB9 AGO2 shRNA Haematopoietic_and_lymphoid_tissue K562 0.57641 -0.79484 0.00664 0.10236 DataSet_02_132
HOXB9 RBM15 shRNA Haematopoietic_and_lymphoid_tissue K562 0.64663 -0.62898 0.00164 0.02091 DataSet_02_143
HOXB9 TAF15 shRNA Haematopoietic_and_lymphoid_tissue K562 0.60368 -0.72813 0.75913 0.86461 DataSet_02_163
HOXB9 ATF4 siRNA Skin A375 0.388567 -1.36376 0.0149221953464937 0.775512819201899 DataSet_03_018
HOXB9 JUN siRNA Skin Ma-Mel-15 0.64891 -0.623909 0.0437867014007521 0.56285436831539 DataSet_03_143
HOXB9 MEF2D shRNA Liver HuH7 3.81657 1.93228 - - DataSet_03_162
HOXB9 MEF2D siRNA Liver HuH7 4.2395 2.08389 - - DataSet_03_163
HOXB9 MITF siRNA Skin Ma-Mel-15 0.475795 -1.07159 0.00800397843802425 0.184591752726934 DataSet_03_166
HOXB9 MITF siRNA Skin Ma-Mel-15 0.617428 -0.695657 0.0136755728242614 0.164078491519312 DataSet_03_167
HOXB9 MYB siRNA Cord_Blood CD34+ progenitor cells 0.464414 -1.10652 - - DataSet_03_170
HOXB9 MYC siRNA Central_nervous_system DAOY M2.1 0.572215 -0.80537 1.17274924177119e-06 9.12864300163739e-06 DataSet_03_178
HOXB9 SOX11 siRNA Lung_fibroblast NHLF 0.436108 -1.19724 0.236122064338001 0.607523123043177 DataSet_03_238
HOXB9 SP1 siRNA Ovary OVSAYO 1.67994 0.748409 0.123399246596572 0.416705314925064 DataSet_03_251
HOXB9 STAT3 CRISPR Embryo hESC 0.00703544 -7.15114 0.000232447889704794 0.0120919503687591 DataSet_03_258
HOXB9 TFAP2C siRNA Mammary_gland MCF7 1.68984 0.756888 0.0388114993878116 0.359143373513608 DataSet_03_274
HOXB9 CDC5L CRISPR Haematopoietic_and_lymphoid_tissue K562 0.588992 -0.763681 0.00167610916851768 0.0452308617416838 DataSet_04_002
HOXB9 MARK2 shRNA Haematopoietic_and_lymphoid_tissue K562 1.91551 0.937726 0.00202852155160462 0.0141250229780629 DataSet_04_012
HOXB9 NKRF shRNA Haematopoietic_and_lymphoid_tissue K562 0.294723 -1.76257 0.0299535627116277 0.0984589169988278 DataSet_04_014
HOXB9 NUP35 shRNA Haematopoietic_and_lymphoid_tissue K562 2.07402 1.05243 0.000843004572960192 0.0153372676273991 DataSet_04_015
HOXB9 YBX1 CRISPR Liver HepG2 2.33333 1.22239 0.464247441805362 0.972884761036538 DataSet_04_039
HOXB9 PAN2 CRISPR Liver HepG2 0.125 -3 0.315024652617848 0.495390664229758 DataSet_04_066
HOXB9 CALR shRNA Liver HepG2 0.444444 -1.16992 0.648434883341641 0.771219041593647 DataSet_04_053
HOXB9 SNW1 CRISPR Haematopoietic_and_lymphoid_tissue K562 0.464336 -1.10676 9.5706720169056e-05 0.0131324202594527 DataSet_04_049
HOXB9 DPF2 CRISPRi Haematopoietic_and_lymphoid_tissue K562 1.74979 0.807179 0.000225317814818646 0.00703099089740252 DataSet_02_14
HOXB9 ERF CRISPRi Haematopoietic_and_lymphoid_tissue K562 1.50991 0.594464 0.00376271950919009 0.0267424942935719 DataSet_02_34
HOXB9 HDGF shRNA Haematopoietic_and_lymphoid_tissue K562 1.96647 0.97561 0.000253559614324013 0.00406454836181464 DataSet_04_059
HOXB9 PRPF6 shRNA Haematopoietic_and_lymphoid_tissue K562 0.645071 -0.63247 0.0166397193224398 0.272671172910861 DataSet_04_065
HOXB9 SMARCA4 siRNA Colon HCT116 2.2506 1.17031 3.138549e-03 0.1301247 DataSet_03_302
HOXB9 ELF3 CRISPR Bile_duct HBDEC2 1.58648 0.66583 4.027076e-05 6.996515e-04 DataSet_03_304
HOXB9 SNAI2 shRNA Pancreas KLM1 0.508502 -0.975675 1.096976e-01 0.43150956 DataSet_03_307
HOXB9 TET1 CRISPR Mammary_gland MDA-MB-231 3.1502 1.65544 2.894142e-04 5.566387e-03 DataSet_03_347
HOXB9 SKI CRISPR Blood HL60 2.24276 1.16527 9.277835e-02 0.427220428 DataSet_03_351
HOXB9 ESR1 siRNA Mammary_gland MCF7 1.65029 0.72272 6.166797e-04 0.0155622466 DataSet_03_352
HOXB9 TET1 CRISPR Mammary_gland Hs578T 0.280348 -1.83471 2.890952e-01 4.846539e-01 DataSet_03_355
HOXB9 PTPN14 CRISPR Brain U5-NPC 0.478723 -1.06274 1.517885e-01 0.38102969 DataSet_03_357
HOXB9 TP53 CRISPR Brain U5-NPC 12.5 3.64386 3.732473e-01 5.029011e-01 DataSet_03_358
HOXB9 ARID2 shRNA Haematopoietic_and_lymphoid_tissue MM.1S 0.52777 -0.922019 1.724075e-01 2.624139e-01 DataSet_03_362
HOXB9 EP300 shRNA Mammary_gland MCF10AT 0.361702 -1.46713 1.543201e-02 0.090895600 DataSet_03_364
HOXB9 TP53 knockout Stomach SNU1 2.82244 1.49694 0.0036049013 0.9301241 DataSet_03_365
HOXB9 ZNF148 shRNA Mammary_gland MDA-MB-231 0.370991 -1.43054 3.703140e-03 0.047217235 DataSet_03_366
HOXB9 USP22 shRNA Liver PLC_PRF_5 cells 0.179191 -2.48043 1.520302e-03 0.06724518 DataSet_03_368
HOXB9 DNMT3A knockout Embryo_kidney HEK293T 30.3514 4.92369 - - DataSet_03_369
HOXB9 ZFP36L1 siRNA Urinary_bladder J82 2.78669 1.47855 - - DataSet_03_371
HOXB9 DDX5 shRNA Stomach HGC-27 4.09195 2.03279 - - DataSet_03_379
HOXB9 NFKB2 siRNA Bone_marrow U2OS 2.08238 1.05823 1.821285e-03 0.07478517 DataSet_03_381
HOXB9 TCF19 CRISPR Oral_squamous CAL27 2.73947 1.45389 4.892082e-03 0.0481739569 DataSet_03_383
HOXB9 YY1 shRNA Brain GSC1517 2.5 1.32193 - - DataSet_03_384
HOXB9 KDM5A CRISPR Lung GLC16 0.35271 -1.50344 1.510861e-01 0.273022755 DataSet_03_392
HOXB9 ILF2 siRNA Stomach SGC-7901 2.66 1.41143 0.3810921530 0.58653633 DataSet_03_393
HOXB9 IKZF2 CRISPR Lymph CAR T Cell 0.329084 -1.60347 7.796775e-01 0.959663372 DataSet_03_397
HOXB9 HMGA1 shRNA Bile_duct HUCCT1 1.66292 0.73372 1.358158e-01 0.411453265 DataSet_03_400
HOXB9 EHF shRNA Stomach MKN7 3.30383 1.72414 - - DataSet_03_402
HOXB9 TFAP2A knockout Embryo H9 1.6 0.678072 3.949124e-01 0.52041651 DataSet_03_405
HOXB9 CHD1 shRNA Prostate LNCaP 0.30033 -1.73538 2.008241e-02 3.195889e-01 DataSet_03_407
HOXB9 MAP3K7 shRNA Prostate LNCaP 0.232673 -2.10362 6.567278e-03 6.426652e-02 DataSet_03_408
HOXB9 STRAP knockout Nerve SK-N-AS 12.9495 3.69482 - - DataSet_03_409
HOXB9 E2F1 siRNA Prostate LNCaP 0.483077 -1.04967 3.826791e-04 0.0874832135 DataSet_03_413
HOXB9 E2F2 siRNA Prostate LNCaP 0.44 -1.18442 1.589851e-05 1.234828e-03 DataSet_03_414
HOXB9 ZKSCAN3 CRISPR Colon HCT116 0.325878 -1.6176 3.555164e-02 0.374169090 DataSet_03_415
HOXB9 FOXK2 shRNA Ovary OVCAR-5 0.66274 -0.593485 8.332958e-02 0.24735756 DataSet_03_419
HOXB9 PRDM1 CRISPR Lymph CD8+ T cells 0.631111 -0.664034 - - DataSet_03_421
HOXB9 FOXQ1 CRISPR Lymph Primary CD4+ T cells 1.97273 0.980192 - - DataSet_03_422
HOXB9 MAEL CRISPR Liver Alexander cells 0.175055 -2.51412 - - DataSet_03_423
HOXB9 FOXP3 CRISPR Peripheral_blood Naive Treg 0.234637 -2.0915 5.450123e-01 0.801152825 DataSet_03_427
HOXB9 LHX2 shRNA Bone_marrow ES-derived RPE cells 2 1 4.481511e-01 1.000000e+00 DataSet_03_428
HOXB9 USP7 shRNA Skin xenograft cells 0.433541 -1.20576 0.26482619 0.4348960 DataSet_03_431
HOXB9 PLAG1 shRNA Cord_blood Lin-CD34+ HSPCs 4 2 - - DataSet_03_432
HOXB9 FOXA2 CRISPR Liver iPSCs-derived progenitors and mature hepatocytes 2 1 5.297282e-01 0.95189163 DataSet_03_439
HOXB9 SETDB1 shRNA Colon HCT116 3.67276 1.87686 - - DataSet_03_440
HOXB9 HMG20A siRNA Mammary_gland MDA-MB-231 1.94061 0.956509 0.0194992290 0.1944703 DataSet_03_442
HOXB9 FOSL1 siRNA Prostate MSKPCa3 0.599119 -0.739086 0.0195312911 0.3503058 DataSet_03_445
HOXB9 CAMTA1 knockout Embryo_kidney HEK293T 0.613063 -0.705892 5.065822e-03 0.09359944 DataSet_03_448
HOXB9 CBX2 siRNA Mammary_gland MCF7 0.61935 -0.691173 2.905564e-01 0.4462323995 DataSet_03_451
HOXB9 SMARCA2 shRNA Lung HCC2302 0.293009 -1.77098 3.078729e-11 3.000226e-10 DataSet_03_455
HOXB9 PPARG siRNA Aortic_valve Valvular endothelial cell 2 1 7.472876e-01 9.172960e-01 DataSet_03_456
HOXB9 ARID1A shRNA Bile_duct MMNK1 1.54311 0.625839 1.755249e-01 0.471744142 DataSet_03_458
HOXB9 STAT3 shRNA Liver HepG2 5.06753 2.34128 4.442316e-05 0.0065096373 DataSet_03_465
HOXB9 SMARCA1 Cas13 Embryo_kidney HEK293T 0.633803 -0.657894 - - DataSet_03_466
HOXB9 LIN28A siRNA Mammary_gland MCF7M 2.29628 1.1993 1.912920e-01 0.5615775 DataSet_03_469
HOXB9 LIN28A siRNA Mammary_gland MCF7M 2.29628 1.1993 1.912920e-01 0.5615775 DataSet_03_470
HOXB9 EZH2 siRNA Prostate LNCaP 0.65042 -0.620557 - - DataSet_03_472
HOXB9 CREBBP CRISPR Lymph U2932 2 1 5.844060e-01 1.0000000 DataSet_03_474
HOXB9 CDC5L CRISPR Haematopoietic_and_lymphoid_tissue K562 0.588992 -0.763681 0.0002257023 0.010836246 DataSet_04_074
Regulation Region
 
T(co)Fs that significantly regulate RBM14 by the evidences of both expression and ChIP-seq/motif
Expression Atlas of HOXB9
Gene Expression in Human Normal Tissues (GTEx) Gene Expression in Cancer Cell Lines (CCLE)
Gene Expression in Human Cancers (TCGA) Gene Expression in Encode Cell Lines