Gene Overview
Target Gene: Xist
NCBI Official Symbol: Xist
Entrez ID: 213742
Ensembl ID: ENSMUSG00000086503
Gene Full Name: inactive X specific transcripts
Strand: -
Gene Locus: X D|X 46.15 cM
External Links:

Xist Significantly Regulated by These T(co)Fs

T(co)Fs that Activate Xist   
T(co)Fs that Repress Xist
The Intensity of the Gene Regulated by T(co)Fs:
Xist-T(co)F Pairs
Target
Gene		 T(co)F Knock
-Method		 Tissue Type Biosample
Name		 Fold
Change		 Log2FC P-value Corrected
_P		 Dataset ID
Xist Adnp knockout Embryo Whole embryonic body 0.326629 -1.61427 0.152679973010072 0.52176461027382 DataSet_11_001
Xist Ahr knockout Lung Lung 0.656134 -0.607938 0.537367924604133 0.999996968611848 DataSet_11_003
Xist Arid1a knockout Liver Liver 0.63402 -0.6574 0.819949225631401 0.999999999999956 DataSet_11_004
Xist Atoh1 knockout Gastrointestinal_tissue Intestinal epithelial Lgr5(hi) stem cells 0.211294 -2.24268 0.00180462761595841 0.00862362838690827 DataSet_11_010
Xist Bcl6 knockout Bone_marrow Myeloid cells 0.0109933 -6.50723 2.57189993678763e-12 1.22595837321361e-08 DataSet_11_015
Xist Cebpb knockout Bone_marrow Bone marrow-derived macrophages 1.62112 0.69699 - - DataSet_11_021
Xist Cebpe knockout Bone_marrow Bone marrow-derived macrophages 1.81625 0.86096 - - DataSet_11_023
Xist Dmrt1 knockout Ovary Ovary 0.312307 -1.67896 0.0854845118740557 0.336120239010387 DataSet_11_030
Xist Dmrt1 knockout Ovary Ovary 0.312307 -1.67896 0.0854845118740557 0.336120239010387 DataSet_11_031
Xist E2f4 knockout Brain Forebrain 0.114984 -3.1205 - - DataSet_11_033
Xist Erg knockdown Bone_marrow HSPCs 1.57301 0.653532 0.0524039952118555 0.88026135071672 DataSet_11_038
Xist Foxp1 knockout Eye Lens 0.622807 -0.683143 - - DataSet_11_044
Xist Gata5 knockout Lung Left lung 0.416821 -1.2625 0.323765977010034 0.485078987565778 DataSet_11_051
Xist Hsf4 knockout Eye Lens 0.425473 -1.23286 0.21735727318695 0.987999303842427 DataSet_11_058
Xist Irf6 knockout Skin Skin 0.00993659 -6.65303 0.0548756766446751 0.293117797910689 DataSet_11_062
Xist Irf8 knockout Lymph Splenic CD11b+Gr-1 cells 1.522 0.605972 0.00588659879723556 0.0522653342914317 DataSet_11_063
Xist Jarid2 knockout Pancreas Embryonic pancreas 3.03446 1.60144 0.0679241846014205 0.758178814946143 DataSet_11_064
Xist Lhx8 knockout Gonads Oocytes 0.640313 -0.643151 0.534389501069382 0.998630964563827 DataSet_11_069
Xist Lhx8 knockout Ovary Ovary 3.69171 1.88429 0.00564486981268055 0.0381500288962546 DataSet_11_070
Xist Lmx1b knockout Limb Proximal limb 9.53314 3.25295 0.027804207864894 0.441349059835755 DataSet_11_071
Xist Lmx1b knockout Kidney Kidney 0.448658 -1.15631 0.265599083259281 0.608881170726829 DataSet_11_072
Xist Mafg knockout Embryo Whole embryo 0.000891002 -10.1323 1.13277199136063e-16 8.1589790631068e-13 DataSet_11_073
Xist Mbd2 knockout Lymph GFP+ BM leukemia cells 0.00680342 -7.19952 3.09412949644901e-12 3.20876699429244e-08 DataSet_11_076
Xist Meis1 knockout Hematopoietic KSL hematopoietic cells 0.617954 -0.69443 0.938740924313303 0.995635220774426 DataSet_11_081
Xist Mkx knockout Tooth PDL 0.612401 -0.707451 0.146567782518508 0.999970897748702 DataSet_11_083
Xist Nfil3 knockout Bone_marrow Prepro NK cells 2.2727 1.18441 0.441137280245426 0.669718246023494 DataSet_11_090
Xist Pax5 knockout Bone_marrow B220+ cells 65.5982 6.03558 0.101217725144166 0.494969738423682 DataSet_11_100
Xist Pax6 knockout Embryo Surface ectoderm 9.30534 3.21806 0.316683051322338 0.829547889913431 DataSet_11_101
Xist Pitx2 knockout Eye Cornea 1.78556 0.836379 0.586620427898135 0.835731826825222 DataSet_11_103
Xist Plagl2 knockout Intestine Small intestine 44.5556 5.47753 0.07761550335678 0.32862399401466 DataSet_11_104
Xist Prdm1 knockout Intestine Mid-intestine 0.595703 -0.747336 0.0156698028093569 0.0191461110522958 DataSet_11_106
Xist Prdm2 shRNA Muscle C2C12 3.17258 1.66566 0.00107503823126436 0.390421409232647 DataSet_11_108
Xist Prox1 knockout Liver Liver 0.0276887 -5.17456 - - DataSet_11_109
Xist Rest knockout Brain Brain 0.00439615 -7.82955 0.0211899492410291 1 DataSet_11_113
Xist Runx1 knockout Embryo Embryo 0.448801 -1.15585 0.925290750060031 0.999961610631375 DataSet_11_114
Xist Runx1 knockout Lymph ProB cells 0.498919 -1.00312 0.169640662510222 0.475397494410669 DataSet_11_116
Xist Runx2 knockout Humeri Embryonic humeri 1.51902 0.603142 0.344752085372758 0.999582830775196 DataSet_11_119
Xist Smad1 knockout Lung Lung left lobe 8.32868 3.05809 0.103442217073628 0.542998753027287 DataSet_11_126
Xist Smad4 siRNA Brain bEnd3 268.161 8.06696 - - DataSet_11_127
Xist Smad4 knockout Aorta Aortic arteries 0.391174 -1.35412 0.859232854618797 0.964306511425164 DataSet_11_128
Xist Snai1 knockout Embryo Teratoma 1.71332 0.776793 - - DataSet_11_130
Xist Sox11 knockout Eye Retina 86.6908 6.43781 - - DataSet_11_137
Xist Sox11 knockout Brain Cortex 0.0085043 -6.87759 - - DataSet_11_138
Xist Sox17 siRNA Embryo NG4 1.53449 0.617762 0.00713933088331214 0.147143834364891 DataSet_11_139
Xist Sox9 knockout Lung Trachea 0.580526 -0.784566 0.0897599225034161 0.382694069591035 DataSet_11_144
Xist Spdef knockout Stomach Stomach 0.626489 -0.674639 0.322674143182681 0.906520586026976 DataSet_11_147
Xist Tbx1 knockout Ear Otic vesicles 0.393429 -1.34582 0.200269004882003 0.996209135879357 DataSet_11_154
Xist Tet2 shRNA Embryo ES cells 0.0195483 -5.67681 - - DataSet_11_161
Xist Thap11 knockout Heart Heart 0.40777 -1.29417 0.0440997047150522 0.999994817864919 DataSet_11_167
Xist Vax2 knockout Eye Whole eye 0.391893 -1.35147 0.319048518855392 0.999998533525589 DataSet_11_173
Xist Vdr knockout Skin Skin 1.84805 0.886006 - - DataSet_11_177
Xist Yy1 knockout Intestine Jejunum crypt epithelium 0.537237 -0.896369 0.000300590717595666 0.00858155476095148 DataSet_11_183
Xist Pogz knockdown Liver fetal liver 1.90154 0.927169 4.124688e-01 0.6749195 DataSet_11_188
Xist Dnmt1 knockout Embryo Embryonic fibroblasts 0.201188 -2.31339 9.165209e-05 3.015266e-03 DataSet_11_192
Xist Dnmt1 shRNA Embryo Embryonic fibroblasts 1.59487 0.673441 - - DataSet_11_196
Xist Ezh2 knockout Bone_marrow CD45.2+LSK cells 0.193512 -2.3695 - - DataSet_11_220
Xist Bptf shRNA Mammary_gland 4T1 cells 0.591862 -0.756667 1.718527e-01 0.622021559 DataSet_11_223
Xist Bcl11b knockdown Embryo Embryonic fibroblasts 0.0148218 -6.07614 - - DataSet_11_226
Xist Crebbp knockout Spleen Germinal center B cells 0.179486 -2.47806 2.625269e-01 0.883813315 DataSet_11_227
Xist Bcl11b knockout Main_olfactory_epithelium main olfactory epithelium (MOE) 87.1258 6.44503 - - DataSet_11_207
Xist Dux siRNA Embryo ES cells 1.83304 0.874241 1.275110e-01 0.8774371149 DataSet_11_239
Xist Ncl siRNA Embryo ES cells 0.351304 -1.50921 5.588770e-01 0.7707776772 DataSet_11_240
Xist Dnmt3a siRNA Embryo iPSC 4.49194 2.16734 - - DataSet_11_241
Xist Dnmt3b siRNA Embryo iPSC 0.645859 -0.630708 - - DataSet_11_242
Xist Lin28a knockout Heart Heart 188.805 7.56075 0.2500763543 0.8777652 DataSet_11_243
Xist Dnmt1 siRNA Embryo Embryo 1.88445 0.914146 - - DataSet_11_248
Xist Kdm2a CRISPR Embryo ES cells 2.39655 1.26096 0.2726433753 1.0000000 DataSet_11_251
Xist Mecp2 knockout Adipose_tissue brown adipose tissue 0.541678 -0.884493 8.744149e-01 0.955125621 DataSet_11_253
Xist Mecp2 knockout Adipose_tissue inguinal adipose tissue 1.69497 0.76126 7.688693e-01 0.8794507 DataSet_11_254
Xist Dux knockout Embryo Embryo 0.0783734 -3.67349 3.149293e-03 1.737204e-02 DataSet_11_269
Xist Mef2d CRISPR Heart Cardiac ventricle 0.359413 -1.47628 3.941587e-01 0.6275636206 DataSet_11_270
Xist Myc CRISPR Skeletal_muscle muscle stem cells 0.0957719 -3.38425 5.208231e-01 0.85992309 DataSet_11_272
Xist Dux knockout Embryo Embryo 0.0783734 -3.67349 3.149284e-03 1.737030e-02 DataSet_11_273
Xist Myod1 CRISPR Skeletal_muscle myoblast 1.69586 0.762019 8.407186e-04 4.286535e-03 DataSet_11_275
Xist Ezh2 siRNA Bone_marrow Mesenchymal stem cells 1.75 0.807355 1.424186e-01 4.183459e-01 DataSet_11_276
Xist Gsk3b CRISPR Neuron mPFC D2 neurons 2.42013 1.27508 9.755026e-01 0.99652781 DataSet_11_277
Xist Ssrp1 CRISPR Embryo ES cells 1.93846 0.954912 1.051214e-01 0.7762809 DataSet_11_278
Xist Usp7 knockout Embryo ES cells 1.71975 0.782195 1.964965e-01 0.5913015 DataSet_11_279
Xist Setd2 knockout Kidney primary renal tubular epithelial (RTE) cells 682.627 9.41495 - - DataSet_11_285
Xist Fli1 CRISPR Lymph CD8 T cells 1.56641 0.647464 9.361921e-01 0.9999740103 DataSet_11_288
Xist Irf8 knockout Brain mice brain 660.32 9.36702 1.989299e-10 3.299849e-06 DataSet_11_292
Xist Mkl1 knockout Bone_marrow Bone marrow differentiated macrophages 2 1 6.271536e-01 0.8218326564 DataSet_11_294
Xist Ssrp1 CRISPR Embryo ES cells 4.76191 2.25154 1.096540e-02 0.16168368 DataSet_11_296
Xist Phf8 knockout prostate Prostate 0.285714 -1.80736 0.1887364342 0.4361919 DataSet_11_298
Xist Arid2 knockout Muscle LSK 2.07172 1.05083 3.952178e-22 2.630702e-18 DataSet_11_301
Xist Foxp3 CRISPR Spleens_and_lymphnodes CD4+ Th0 cells 0.416539 -1.26348 - - DataSet_11_305
Xist Jmjd6 knockout Bone_marrow Lin-Sca1+Kit+ (LSK) haematopoietic stem and progenitor cells 0.476966 -1.06804 - - DataSet_11_306
Xist Esr1 knockout Liver Liver 0.609995 -0.713131 3.362913e-01 1.0000000 DataSet_11_307
Xist Myc CRISPR Skeletal_muscle quiescent muscle stem cell 212.719 7.73281 3.676754e-01 0.80359421 DataSet_11_310
Xist Suz12 knockout Lung Alveolar macrophage 2.66667 1.41504 3.229203e-01 0.7387830849 DataSet_11_311
Xist Actl6a knockout Nerve sciatic nerve 0.620919 -0.687524 3.369609e-01 0.560998871 DataSet_11_314
Xist Ahr knockout Liver Liver 4 2 3.009911e-02 0.3659932657 DataSet_11_315
Xist Satb2 knockout Colon Intestine epithelium 1.66368 0.734377 9.311613e-01 0.9675504833 DataSet_11_316
Xist Arid1b knockout Bone_marrow bone marrow leukemia cells 117.2 6.87283 1.160657e-04 0.0196473356 DataSet_11_317
Xist Arid2 knockout Bone_marrow bone marrow leukemia cells 0.525775 -0.927481 4.880539e-01 0.7935526 DataSet_11_318
Xist Kat7 knockout Thymic_lobes Thymic epithelial cells 1.74702 0.804896 3.432477e-01 5.568937e-01 DataSet_11_320
Xist Bud31 knockout Testis Spermatogonial stem cells 7.125 2.83289 5.361238e-01 0.8600602 DataSet_11_321
Xist Setdb1 shRNA Neuron NE-4C 0.0819409 -3.60927 - - DataSet_11_323
Xist Snai1 knockdown Heart Heart 0.577623 -0.791799 4.564284e-01 0.63116563 DataSet_11_326
Xist Dnmt3l knockout Testis Spermatogonial progenitor cells 0.145526 -2.78065 - - DataSet_11_328
Xist Dnmt1 knockout Brain Cortex 0.107975 -3.21123 7.908206e-01 0.9551594178 DataSet_11_329
Xist Ezh2 shRNA Brain SVZ derived neural stem cells 0.370661 -1.43183 1.540739e-01 4.491747e-01 DataSet_11_332
Xist Ezh2 knockout Eye Retina 0.00306321 -8.35074 4.608112e-02 3.413756e-01 DataSet_11_333
Xist Dnmt1 siRNA Heart embryonic cardiomyocytes 0.446497 -1.16328 2.900463e-03 0.011467106 DataSet_11_340
Xist Pcbp1 shRNA Thymus Th1 2 1 9.545876e-01 1.00000000 DataSet_11_343
Regulation Region
 
T(co)Fs that significantly regulate Crebbp by the evidences of both expression and ChIP-seq/motif
Expression Atlas of Xist
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)