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Sample of information

Sample:      txt

SE, SE element and TE for each sample

Species Biosample type Tissue type Biosample name SE SE element TE
Arabidopsis_thaliana Tissue Cotyledons cotyledons_2-week-old_wt TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Cotyledons cotyledons_2-week-old_atxr5/6_(W) TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Seedlings Col-0_acc1-5_acla-1i-1_seedlings_12_days_after_germination TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Seedlings Col-0_acc1-5_acla-1i_seedlings_12_days_after_germination TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Seedlings Col-0_acc1-5_seedlings_12_days_after_germination TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Seedlings Col-0_WT_seedlings_12_days_after_germination TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Inflorescence inflorescence_pAP1::AP1-GRap1cal_stage_2_of_flower_development TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Inflorescence inflorescence_pAP1::AP1-GRap1cal_stage_4-5_of_flower_development TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Root epidermal Non-hair_cell_nuclei_from_root_epidermal_tissue TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Young shoots Col-0_young_shoots_from_two-week_old_seedlings_wt TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Young shoots young_shoots_from_two-week_old_seedlings_ddcc TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Young shoots young_shoots_from_two-week_old_seedlings_met1-3 TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Mature leaves Col-0_mature_leaves_from_five-week_old_wt TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Mature leaves mature_leaves_from_five-week_old_ddcc TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Mature leaves mature_leaves_from_five-week_old_met1-3 TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Mature leaves mature_leaves_from_five-week_old_mddcc TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Sperm nuclei Col-0_Sperm_nuclei_wt TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Root Col-0_3D-Root-Dis_1_year(s) TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Root Col-0_3D-Root-Pro_2_year(s) TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Root Col-0_7D-Root-Dis_1_year(s) TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Tissue Root Col-0_7D-Root-Pro_1_year(s) TAIR10 TAIR10 TAIR10

SE, SE element and TE for each tissue

Species Tissue type SE SE element TE Gene Sample infomation
Arabidopsis_thaliana Cotyledons TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Seedlings TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Inflorescence TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Root epidermal TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Young shoots TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Mature leaves TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Sperm nuclei TAIR10 TAIR10 TAIR10
Arabidopsis_thaliana Root TAIR10 TAIR10 TAIR10

Annotation

TF ChIP-seq: DHS:
Conserved regions: Histone modification:

Package of SE, SE element and TE

Arabidopsis_thaliana Super-enhancer: bed     csv
Arabidopsis_thaliana Super-enhancer element: bed     csv
Arabidopsis_thaliana Typical enhancer: bed     csv