About Enhancer
| Enhancer ID: | E_00116 |
| Species: | Mus musculus |
| Position : | chr11:32165011-32165922   |
| Year: | 2016 |
| Title: | Genetic dissection of the ζ±-globin super-enhancer in vivo. |
| Genome Build: | mm9 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 27376235 |
| Tissue: | liver |
| Tissue Ontology ID: | UBERON:0002107 |
| Cell Source: | Primary mouse fetal liver erythroid cells |
| Cell Type: | erythroblast |
| Cell Ontology ID: | CL:0000765 |
| Experiment Type: | Super-enhancer constituent functional dissection; TF binding assay; Functional perturbation assay; In vivo functional validation |
| High Throughput Method: | DNase-seq; ChIP-seq; ATAC-seq; NG Capture-C; RNA-seq |
| Low Throughput Method: | Targeted in vivo enhancer deletion; Southern blot; sequencing; transgenic/Citrine enhancer reporter assay; RT-qPCR; hematologic phenotyping; In vivo phenotyping |
About Target Gene
| Target gene : | Hba-a1 |
About TF
| TF name : | Nfe2 |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| Nfe2 | Factors involved in megakaryocyte development and platelet production | reactome | 111 |
Enhancer Associated Network
Overlapping Enhancers (mm9)
16 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_02494 | chr11:32145540-32169344 | NA | primitive erythroid lineage cell | NA |
| E_02495 | chr11:32145540-32169344 | NA | primitive erythroid lineage cell | NA |
| E_00112 | chr11:32165011-32165922 | liver | erythroblast | NA |
| E_00113 | chr11:32165011-32165922 | liver | erythroblast | NA |
| E_00114 | chr11:32165011-32165922 | liver | erythroblast | NA |
| E_00115 | chr11:32165011-32165922 | liver | erythroblast | NA |
| E_00117 | chr11:32165011-32165922 | liver | erythroblast | NA |
| E_00118 | chr11:32165011-32165922 | liver | erythroblast | NA |
| E_00119 | chr11:32165011-32165922 | liver | erythroblast | NA |
| E_03322 | chr11:32165011-32165922 | liver | erythroid cell | NA |
| E_03490 | chr11:32165011-32165922 | spleen | erythroblast | NA |
| E_03491 | chr11:32165011-32165922 | spleen | erythroblast | NA |
| E_03492 | chr11:32165011-32165922 | spleen | erythroblast | NA |
| E_03493 | chr11:32165011-32165922 | spleen | erythroblast | NA |
| E_03494 | chr11:32165011-32165922 | spleen | erythroblast | NA |
| E_03495 | chr11:32165011-32165922 | spleen | erythroblast | NA |
Expression of Target Genes for the Enhancer