Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_00667
Species: Homo sapiens
Position : chr13:37378439-37578439
Year: 2016
Title: Active medulloblastoma enhancers reveal subgroup-specific cellular origins
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: medulloblastoma
PMID:  26814967
MONDO: MONDO:0005146
Tissue: Cerebellum
Tissue Ontology ID: UBERON:0002037
Cell Source: Primary Medulloblastoma Tissue
CVCL ID:
Cell Type: medulloblastoma cell
Cell Ontology ID: CL:0000127
Experiment Type: Enhancer activity assay, Chromatin interaction assay
High Throughput Method: 3C-seq, ChIP-seq, RNA-seq
Low Throughput Method: RT-RT-qPCR
About Target Gene
Target gene : SMAD9
About TF
TF name :
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 2 found
Enhancer ID Position Tissue Cell Disease
E_00666 chr13:37378439-37578439 Brain medulloblastoma cell medulloblastoma
E_00511 chr13:37428439-37429439 Brain medulloblastoma cell medulloblastoma
Expression of Target Genes for the Enhancer