About Enhancer
| Enhancer ID: | E_00814 |
| Species: | Homo sapiens |
| Position : | chr3:147033502-147035102   |
| Year: | 2016 |
| Title: | Active medulloblastoma enhancers reveal subgroup-specific cellular origins |
| Genome Build: | hg19 |
| Enhancer Type: | Enhancer |
| Condition: | Disease |
| Disease Name: | medulloblastoma |
| PMID: | 26814967 |
| MONDO: | MONDO:0005146 |
| Tissue: | Brain |
| Tissue Ontology ID: | UBERON:0000955 |
| Cell Source: | D425 |
| CVCL ID: | |
| Cell Type: | medulloblastoma cell |
| Cell Ontology ID: | CL:0000127 |
| Experiment Type: | Super-enhancer mapping, Enhancer activity assay, Gene expression assay |
| High Throughput Method: | ChIP-seq, RNA-seq, Whole-genome sequencing |
| Low Throughput Method: | Zebrafish transgenic reporter assay, RT-RT-qPCR, Immunohistochemistry |
About Target Gene
| Target gene : | ZIC1 |
About TF
| TF name : | ZIC1; ZIC4 |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer Associated Network
Overlapping Enhancers (hg19)
5 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_00850 | chr3:147013502-147063501 | Brain | medulloblastoma cell | medulloblastoma |
| E_00910 | chr3:147013502-147063502 | Brain | medulloblastoma cell | medulloblastoma |
| E_00811 | chr3:147033502-147035102 | Brain | medulloblastoma cell | medulloblastoma |
| E_00812 | chr3:147033502-147035102 | Brain | medulloblastoma cell | medulloblastoma |
| E_00813 | chr3:147033502-147035102 | Brain | medulloblastoma cell | medulloblastoma |
Expression of Target Genes for the Enhancer