Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_00949
Species: Homo sapiens
Position : chr17:48105016-48105270
Year: 2019
Title: C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: lung adenocarcinoma
PMID:  30664627
MONDO: MONDO:0005032
Tissue: Lung
Tissue Ontology ID: UBERON:0002048
Cell Source: A549 human alveolar basal epithelial adenocarcinoma
CVCL ID: CVCL_0023
Cell Type: lung adenocarcinoma cell
Cell Ontology ID: CL:0001069
Experiment Type: Enhancer activity assay
High Throughput Method: CAGE-seq, RNA-seq
Low Throughput Method: Single-molecule fluorescence in situ hybridization (smFISH)
About Target Gene
Target gene : PDK2
About TF
TF name :
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_00411 chr17:48100000-48130000 Skin melanoma cell skin melanoma
E_00412 chr17:48100000-48130000 Skin melanoma cell skin melanoma
E_00413 chr17:48100000-48130000 Skin melanoma cell skin melanoma
Expression of Target Genes for the Enhancer