Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_01146
Species: Homo sapiens
Position : chr1:204518514-204561889
Year: 2016
Title: Chromatin interactions and candidate genes at ten prostate cancer risk loci
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: prostate cancer
PMID:  26979803
MONDO: MONDO:0008315
Tissue: Prostate
Tissue Ontology ID: UBERON:0002367
Cell Source: DU-145
CVCL ID: CVCL_0105
Cell Type: prostate carcinoma cell
Cell Ontology ID: CL:0000066
Experiment Type: Chromatin interaction assay, TF binding assay, Gene expression assay
High Throughput Method: Capture 3C-seq, ChIP-seq, RNA-seq, SNP genotyping array
Low Throughput Method: 3C-qPCR, RT-qPCR
About Target Gene
Target gene : PPP1R15B
About TF
TF name : AR; FOXA1; HOXB13; CTCF
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_01145 chr1:204518514-204561889 Prostate prostate carcinoma cell prostate cancer
E_01147 chr1:204518514-204561889 Prostate prostate epithelial cell --
E_01148 chr1:204518514-204561889 Prostate prostate epithelial cell --
Expression of Target Genes for the Enhancer