Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_01162
Species: Homo sapiens
Position : chr6:122800000-122850000
Year: 2016
Title: Chromatin interactions and candidate genes at ten prostate cancer risk loci
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: prostate cancer
PMID:  26979803
MONDO: MONDO:0008315
Tissue: Prostate
Tissue Ontology ID: UBERON:0002367
Cell Source: LNCaP
CVCL ID: CVCL_0395
Cell Type: prostate carcinoma cell
Cell Ontology ID: CL:0000066
Experiment Type: Chromatin interaction assay, Gene expression assay
High Throughput Method: Capture 3C-seq, RNA-seq, SNP genotyping array
Low Throughput Method: RT-qPCR
About Target Gene
Target gene : RFX6
About TF
TF name :
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_01163 chr6:122800000-122850000 Prostate prostate carcinoma cell prostate cancer
E_01164 chr6:122800000-122850000 Prostate prostate epithelial cell --
E_01165 chr6:122800000-122850000 Prostate prostate epithelial cell --
Expression of Target Genes for the Enhancer