Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_01512
Species: Mus musculus
Position : chr11:112078592-112079149
Year: 2018
Title: Sex reversal following deletion of a single distal enhancer of Sox9.
Genome Build: mm9
Enhancer Type: Enhancer
Condition: Normal
PMID:  29903884
Tissue: testis
Tissue Ontology ID: UBERON:0000473
Cell Source: embryonic gonad
Cell Type: Sertoli cell lineage
Experiment Type: 557-bp Sox9 Enh13 (original paper coordinate); essential endogenous sex-determining enhancer
High Throughput Method: ATAC-seq/DNase-seq; comparative epigenomics
Low Throughput Method: Transgenic enhancer reporter assay; CRISPR/Cas9 Enh13 deletion mouse; RT-qPCR
About Target Gene
Target gene : Sox9
About TF
TF name : Sry
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Sry AndrogenReceptor netpath 167
Sry Deactivation of the beta-catenin transactivating complex reactome 42
Sry Regulation of Androgen receptor activity pid 54
Enhancer Associated Network
Overlapping Enhancers (mm9)
No overlapping enhancers found in mm9 at this locus.
Expression of Target Genes for the Enhancer