Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_01523
Species: Mus musculus
Position : chr17:35504981-35505186
Year: 2015
Title: Functional annotation of native enhancers with a Cas9-histone demethylase fusion.
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
PMID:  25775043
Tissue: embryo
Tissue Ontology ID: UBERON:0000922
Cell Source: mouse embryonic stem cells
Cell Type: embryonic stem cell
Cell Ontology ID: CL:0002322
Experiment Type: Epigenome-editing assay; Functional enhancer-state assay
High Throughput Method: ATAC-seq data integration
Low Throughput Method: dCas9-LSD1 sgRNA targeting of the Pou5f1 proximal enhancer; colony phenotype assay; RT-qPCR
About Target Gene
Target gene : Pou5f1
About TF
TF name : NA
About Regulatory State
Regulatory State : Inactive
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (mm10) 3 found
Enhancer ID Position Tissue Cell Disease
E_01460 chr17:35499359-35507923 NA NA NA
E_01937 chr17:35501113-35507015 NA NA NA
E_01871 chr17:35501272-35506872 NA NA NA
Expression of Target Genes for the Enhancer