About Enhancer
| Enhancer ID: | E_01535 |
| Species: | Mus musculus |
| Position : | chr4:46410632-46411247   |
| Year: | 2020 |
| Title: | Enhancer dependence of cell-type-specific gene expression increases with developmental age. |
| Genome Build: | mm10 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 32817427 |
| Tissue: | liver |
| Tissue Ontology ID: | UBERON:0002107 |
| Cell Source: | MB-1 [Human thyroid carcinoma] |
| CVCL ID: | CVCL_2109 |
| Cell Type: | erythroid progenitor cell |
| Cell Ontology ID: | CL:0000038 |
| Experiment Type: | Functional perturbation assay, Chromatin interaction assay, TF binding assay |
| High Throughput Method: | HiChIP; ChIP-seq; RNA-seq; ATAC-seq |
| Low Throughput Method: | CRISPR Knockout; RT-RT-qPCR |
About Target Gene
| Target gene : | Trmo |
About TF
| TF name : | Gata1 |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| Gata1 | C-MYB transcription factor network | pid | 87 |
| Gata1 | Factors involved in megakaryocyte development and platelet production | reactome | 111 |
| Gata1 | IL3 | netpath | 84 |
| Gata1 | Notch-mediated HES/HEY network | pid | 48 |
| Gata1 | p73 transcription factor network | pid | 80 |
| Gata1 | Signaling events mediated by HDAC Class I | pid | 89 |
| Gata1 | Signaling events mediated by HDAC Class II | pid | 58 |
Enhancer Associated Network
Overlapping Enhancers (mm10)
1 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_01534 | chr4:46410632-46411247 | bone marrow | erythroblast | NA |
Expression of Target Genes for the Enhancer