Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_01539
Species: Mus musculus
Position : chr12:111517811-111518523
Year: 2020
Title: Enhancer dependence of cell-type-specific gene expression increases with developmental age.
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
PMID:  32817427
Tissue: blood
Tissue Ontology ID: UBERON:0000178
Cell Source: MEL cells
Cell Type: definitive erythroblast
Experiment Type: Enhancer activity assay; Functional perturbation assay; Chromatin interaction assay
High Throughput Method: ATAC-seq; H3K27ac ChIP-seq; Myb ChIP-seq; Gata1 HiChIP; RNA-seq
Low Throughput Method: v4C; CRISPR/Cas9 deletion; qRT-PCR
About Target Gene
Target gene : Tnfaip2
About TF
TF name : Myb
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Myb AP-1 transcription factor network pid 71
Myb C-MYB transcription factor network pid 87
Myb Factors involved in megakaryocyte development and platelet production reactome 111
Myb IL2 signaling events mediated by PI3K pid 38
Myb IL4-mediated signaling events pid 66
Myb Notch-mediated HES/HEY network pid 48
Myb Prolactin netpath 105
Myb Hs_Neural_Crest_Differentiation_WP2064_79263 wikipathways 40
Enhancer Associated Network
Overlapping Enhancers (mm10) 2 found
Enhancer ID Position Tissue Cell Disease
E_01538 chr12:111517811-111518523 blood definitive erythroblast NA
E_01571 chr12:111517811-111518523 NA NA NA
Expression of Target Genes for the Enhancer