Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_01688
Species: Mus musculus
Position : chr11:112334364-112335294
Year: 2024
Title: Chromatin profiling identifies chondrocyte-specific Sox9 enhancers important for skeletal development.
Genome Build: mm9
Enhancer Type: Enhancer
Condition: Normal
PMID:  38855864
Cell Source: ATDC-5
CVCL ID: CVCL_3894
Cell Type: chondrogenic cell
Experiment Type: Enhancer activity assay; Differentiation-associated enhancer activity assay
Low Throughput Method: Luciferase Reporter Assay; H3K27ac ChIP-qPCR; RT-qPCR; Western blot; Alcian Blue Staining
About Target Gene
Target gene : Sox9
About TF
TF name : Pitx1
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (mm9) 2 found
Enhancer ID Position Tissue Cell Disease
E_01603 chr11:112334364-112335294 cartilage tissue chondrocyte NA
E_01681 chr11:112334364-112335294 embryo fibroblast NA
Expression of Target Genes for the Enhancer