About Enhancer
| Enhancer ID: | E_01721 |
| Species: | Mus musculus |
| Position : | chr5:28476034-28479024   |
| Year: | 2014 |
| Title: | A novel regulatory element for Shh expression in the lung and gut of mouse embryos. |
| Genome Build: | mm10 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 24157522 |
| Tissue: | lung |
| Tissue Ontology ID: | UBERON:0002048 |
| Cell Source: | Colon Adenocarcinoma Cell Lines |
| Cell Type: | malignant cell |
| Cell Ontology ID: | CL:0001064 |
| Experiment Type: | Enhancer activity assay; TF-binding/chromatin assay; Chromatin interaction assay; In vivo functional validation |
| High Throughput Method: | ChIP-seq |
| Low Throughput Method: | Luciferase reporter assay; Reporter assay; ChIP-qPCR/ChIP; 3C |
About Target Gene
| Target gene : | Shh |
About TF
| TF name : | Rbfox3 |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer Associated Network
Overlapping Enhancers (mm10)
1 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_01722 | chr5:28476034-28479024 | lung | malignant cell | NA |
Expression of Target Genes for the Enhancer