About Enhancer
| Enhancer ID: | E_01986 |
| Species: | Mus musculus |
| Position : | chr12:114182511-114183025   |
| Year: | 2023 |
| Title: | An Igh distal enhancer modulates antigen receptor diversity by determining locus conformation. |
| Genome Build: | mm10 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 36869028 |
| Tissue: | bone marrow |
| Tissue Ontology ID: | UBERON:0002371 |
| Cell Source: | Abl-transformed Rag1-/- pro-B cells |
| Cell Type: | pro-B cell |
| Cell Ontology ID: | CL:0000826 |
| Experiment Type: | Enhancer activity; TF occupancy; chromatin-conformation and V(D)J functional perturbation |
| High Throughput Method: | Hi-C; H3K27ac/H3K4me1 ChIP-seq; ATAC-seq; RNA-seq; V(D)J-seq |
| Low Throughput Method: | CRISPR enhancer deletion; 3C/4C; V(D)J recombination qPCR; ChIP-qPCR; DNA FISH |
About Target Gene
| Target gene : | Igh |
About TF
| TF name : | Pax5 |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| Pax5 | C-MYB transcription factor network | pid | 87 |
| Pax5 | ID | netpath | 38 |
Enhancer Associated Network
Expression of Target Genes for the Enhancer