Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_01989
Species: Mus musculus
Position : chr5:29314497-29315844
Year: 2025
Title: Range extender mediates long-distance enhancer activity
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
Disease Name: --
PMID:  40604280
MONDO:
Tissue: Limb Bud
Tissue Ontology ID: UBERON:0005417
Cell Source: Zone of polarizing activity cells
CVCL ID:
Cell Type: mesenchymal cell
Cell Ontology ID: CL:0000134
Experiment Type: TF binding assay, Enhancer activity assay, Functional perturbation assay
High Throughput Method: ATAC-seq, ChIP-seq, Hi-C, scATAC-seq/scRNA-seq multiome, RNA-seq
Low Throughput Method: Transgenic Reporter Assay, CRISPR Knockout, CRISPR Knock-in, RT-RT-qPCR, Whole-mount in situ hybridization, Skeletal staining, EMSA, Luciferase Reporter Assay
About Target Gene
Target gene : Shh
About TF
TF name : Lhx2; Lhx9; Lef1; Ets1; Etv; Hox
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (mm10) 3 found
Enhancer ID Position Tissue Cell Disease
E_01990 chr5:29314497-29315844 Bone Marrow myeloid progenitor cell --
E_02288 chr5:29314591-29316266 Limb bud limb mesenchyme cell --
E_02316 chr5:29314881-29315667 Limb Bud mesenchymal cell --
Expression of Target Genes for the Enhancer