Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_02117
Species: Homo sapiens
Position : chrX:49273000-49274000
Year: 2026
Title: FOXP3 expression depends on cell-type-specific cis-regulatory elements and transcription factor circuitry.
Genome Build: hg38
Enhancer Type: Enhancer
Condition: Normal
PMID:  41237776
Tissue: blood
Tissue Ontology ID: UBERON:0000178
Cell Source: Primary conventional CD4+ T cells
Cell Type: CD4-positive, alpha-beta T cell
Cell Ontology ID: CL:0000624
Experiment Type: Enhancer activity assay; Functional perturbation assay; TF binding assay
High Throughput Method: Pooled CRISPRi locus-tiling screen; pooled CRISPRn TF screen; ATAC-seq; H3K27ac ChIP-seq; GATA3 ChIP-seq
Low Throughput Method: Paired-Cas9 RNP tiled deletion; CRISPRoff targeted epigenetic silencing; GATA3 knockout; FOXP3 flow cytometry; targeted amplicon sequencing; targeted bisulfite sequencing
About Target Gene
Target gene : FOXP3
About TF
TF name : GATA3
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
GATA3 C-MYB transcription factor network pid 87
GATA3 Calcineurin-regulated NFAT-dependent transcription in lymphocytes pid 50
GATA3 Factors involved in megakaryocyte development and platelet production reactome 111
GATA3 Glucocorticoid receptor regulatory network pid 85
GATA3 IL27-mediated signaling events pid 26
GATA3 Notch signaling pathway pid 58
GATA3 Regulation of nuclear SMAD2/3 signaling pid 82
GATA3 Hs_Endochondral_Ossification_WP474_87977 wikipathways 43
GATA3 Hs_White_fat_cell_differentiation_WP3946_90940 wikipathways 30
Enhancer Associated Network
Overlapping Enhancers (hg38) 2 found
Enhancer ID Position Tissue Cell Disease
E_02127 chrX:49273000-49274000 NA NA NA
E_03055 chrX:49273000-49274000 blood regulatory T cell NA
Expression of Target Genes for the Enhancer