Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_02165
Species: Homo sapiens
Position : chr20:46000017-46000761
Year: 2025
Title: Characterization of a cis-regulatory element upstream of matrix metalloproteinase-9.
Genome Build: hg38
Enhancer Type: Enhancer
Condition: Normal
PMID:  41354677
Tissue: placenta
Tissue Ontology ID: UBERON:0001987
Cell Source: HTR-8/SVneo
CVCL ID: CVCL_3286
Cell Type: trophoblast
Cell Ontology ID: CL:0000358
Experiment Type: Enhancer activity assay; Functional perturbation assay; TF-binding/motif analysis
High Throughput Method: H3K27ac ChIP-seq; comparative epigenomic profiling
Low Throughput Method: Luciferase reporter assay; CRISPR-Cas9 enhancer deletion; RT-qPCR; TF-motif perturbation
About Target Gene
Target gene : MMP9
About TF
TF name : TEAD4
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
TEAD4 PPARA activates gene expression reactome 113
TEAD4 YAP1- and WWTR1 (TAZ)-stimulated gene expression reactome 29
TEAD4 Hs_VEGFA-VEGFR2_Signaling_Pathway_WP3888_90000 wikipathways 153
Enhancer Associated Network
Overlapping Enhancers (hg38) 2 found
Enhancer ID Position Tissue Cell Disease
E_02164 chr20:46000017-46000761 placenta trophoblast NA
E_02166 chr20:46000017-46000761 placenta trophoblast NA
Expression of Target Genes for the Enhancer