About Enhancer
| Enhancer ID: | E_02293 |
| Species: | Homo sapiens |
| Position : | chrX:114038200-114039000   |
| Year: | 2019 |
| Title: | A primate-specific retroviral enhancer wires the XACT lncRNA into the core pluripotency network in humans. |
| Genome Build: | hg38 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 31827084 |
| Tissue: | inner cell mass |
| Tissue Ontology ID: | UBERON:0000087 |
| Cell Source: | WA01 |
| CVCL ID: | CVCL_9771 |
| Cell Type: | embryonic stem cell |
| Cell Ontology ID: | CL:0002322 |
| Experiment Type: | Enhancer activity assay, TF binding assay, Chromatin interaction assay, Functional perturbation assay; Endogenous enhancer perturbation |
| High Throughput Method: | ChIP-seq, RNA-seq, Hi-C, ATAC-seq |
| Low Throughput Method: | CRISPR Knockout, CRISPRi, ChIP-RT-qPCR, RT-RT-qPCR, RNA-FISH, Western blot; CRISPR-Cas9 endogenous deletion/editing |
About Target Gene
| Target gene : | XACT |
About TF
| TF name : | NA |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer Associated Network
Overlapping Enhancers (hg38)
No overlapping enhancers found in hg38 at this locus.
Expression of Target Genes for the Enhancer