About Enhancer
| Enhancer ID: | E_02300 |
| Species: | Homo sapiens |
| Position : | chr1:47679000-47722000   |
| Year: | 2020 |
| Title: | Interrogation of enhancer function by enhancer-targeting CRISPR epigenetic editing. |
| Genome Build: | hg19 |
| Enhancer Type: | Super-enhancer |
| Condition: | Disease |
| Disease Name: | T-cell acute lymphoblastic leukemia |
| PMID: | 31980609 |
| MONDO: | MONDO:0004963 |
| Tissue: | blood |
| Tissue Ontology ID: | UBERON:0000178 |
| Cell Source: | Human chronic myeloid leukemia cell |
| Cell Type: | malignant cell |
| Cell Ontology ID: | CL:0001064 |
| Experiment Type: | Enhancer activity assay, Functional perturbation assay; In vivo functional validation |
| High Throughput Method: | ATAC-seq, ChIP-seq, RNA-seq |
| Low Throughput Method: | Luciferase Reporter Assay, CRISPR Knockout, CRISPRi, qRT-PCR, Western blot; In vivo phenotyping; Xenograft/xenotransplant |
About Target Gene
| Target gene : | TAL1 |
About TF
| TF name : | MYB |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| MYB | AP-1 transcription factor network | pid | 71 |
| MYB | C-MYB transcription factor network | pid | 87 |
| MYB | Factors involved in megakaryocyte development and platelet production | reactome | 111 |
| MYB | IL2 signaling events mediated by PI3K | pid | 38 |
| MYB | IL4-mediated signaling events | pid | 66 |
| MYB | Notch-mediated HES/HEY network | pid | 48 |
| MYB | Prolactin | netpath | 105 |
| MYB | Hs_Neural_Crest_Differentiation_WP2064_79263 | wikipathways | 40 |
Enhancer Associated Network
Overlapping Enhancers (hg19)
17 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_01088 | chr1:47680000-47681000 | blood | T lymphoblast | T-cell acute lymphoblastic leukemia |
| E_04003 | chr1:47704791-47705107 | blood / hematopoietic system | malignant cell | Central Nervous System Leukemia |
| E_00713 | chr1:47704954-47704983 | blood | T-lymphoblast | T-cell acute lymphoblastic leukemia |
| E_00715 | chr1:47704954-47704983 | blood | T cell | T-cell acute lymphoblastic leukemia |
| E_00716 | chr1:47704954-47704983 | blood | T cell | T-cell acute lymphoblastic leukemia |
| E_00717 | chr1:47704954-47704983 | blood | T-lymphoblast | T-cell acute lymphoblastic leukemia |
| E_00718 | chr1:47704954-47704983 | blood | T-lymphoblast | T-cell acute lymphoblastic leukemia |
| E_00719 | chr1:47704954-47704983 | blood | T-lymphoblast | T-cell acute lymphoblastic leukemia |
| E_00720 | chr1:47704954-47704983 | blood | T-lymphoblast | T-cell acute lymphoblastic leukemia |
| E_00721 | chr1:47704954-47704983 | blood | T cell | T-cell acute lymphoblastic leukemia |
| E_00722 | chr1:47704954-47704983 | blood | T cell | T-cell acute lymphoblastic leukemia |
| E_00723 | chr1:47704954-47704983 | blood | T cell | T-cell acute lymphoblastic leukemia |
| E_00724 | chr1:47704954-47704983 | blood | T cell | T-cell acute lymphoblastic leukemia |
| E_00725 | chr1:47704954-47704983 | blood | T cell | T-cell acute lymphoblastic leukemia |
| E_00726 | chr1:47704954-47704983 | blood | T cell | T-cell acute lymphoblastic leukemia |
| E_00727 | chr1:47704954-47704983 | blood | T cell | T-cell acute lymphoblastic leukemia |
| E_00728 | chr1:47704954-47704983 | blood | T cell | T-cell acute lymphoblastic leukemia |
Expression of Target Genes for the Enhancer