Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_02542
Species: Mus musculus
Position : chr10:127874742-127875307
Year: 2007
Title: Mouse naked cuticle 2 (mNkd2) as a direct transcriptional target of Hoxc8 in vivo
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
Disease Name: --
PMID:  17094106
MONDO:
Tissue: Embryo
Tissue Ontology ID: UBERON:0000922
Cell Source: MEF
CVCL ID: CVCL_0003
Cell Type: mouse embryonic fibroblast
Cell Ontology ID: CL:0000057
Experiment Type: Enhancer activity assay, TF binding assay, Functional perturbation assay
High Throughput Method:
Low Throughput Method: Luciferase Reporter Assay, ChIP-RT-qPCR, EMSA, RT-RT-qPCR
About Target Gene
Target gene : Nkd2
About TF
TF name : Hoxc8
About Regulatory State
Regulatory State : Silenced
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (mm10) 1 found
Enhancer ID Position Tissue Cell Disease
E_02541 chr10:127874742-127875307 Embryo fibroblast --
Expression of Target Genes for the Enhancer