Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_02653
Species: Mus musculus
Position : chr11:32115000-32145000
Year: 2016
Title: Genetic dissection of the alpha-globin super-enhancer in vivo
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
Disease Name: --
PMID:  27376235
MONDO:
Tissue: Bone marrow
Tissue Ontology ID: UBERON:0002371
Cell Source: Erythroid progenitor
CVCL ID:
Cell Type: erythroid progenitor cell
Cell Ontology ID: CL:0000038
Experiment Type: Enhancer activity assay, Functional perturbation assay, Chromatin interaction assay
High Throughput Method: ChIP-seq, RNA-seq, 3C
Low Throughput Method: CRISPR Knockout, Transgenic Reporter Assay
About Target Gene
Target gene : Hba1
About TF
TF name : Gata1
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Gata1 C-MYB transcription factor network pid 87
Gata1 Factors involved in megakaryocyte development and platelet production reactome 111
Gata1 IL3 netpath 84
Gata1 Notch-mediated HES/HEY network pid 48
Gata1 p73 transcription factor network pid 80
Gata1 Signaling events mediated by HDAC Class I pid 89
Gata1 Signaling events mediated by HDAC Class II pid 58
Enhancer Associated Network
Overlapping Enhancers (mm10) 2 found
Enhancer ID Position Tissue Cell Disease
E_02960 chr11:32144500-32150000 Fetal Liver erythroid cell --
E_02961 chr11:32145000-32145500 Fetal Liver erythroid cell --
Expression of Target Genes for the Enhancer