About Enhancer
| Enhancer ID: | E_02892 |
| Species: | Mus musculus |
| Position : | chr3:34752523-34766449   |
| Year: | 2019 |
| Title: | Dynamic Enhancer DNA Methylation as Basis for Transcriptional and Cellular Heterogeneity of ESCs |
| Genome Build: | mm10 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| Disease Name: | -- |
| PMID: | 31422875 |
| MONDO: | |
| Tissue: | Embryo |
| Tissue Ontology ID: | UBERON:0000922 |
| Cell Source: | Mouse embryonic stem cells (129¡ÃCast F1; v6.5) |
| CVCL ID: | CVCL_2167 |
| Cell Type: | mouse embryonic stem cell |
| Cell Ontology ID: | CL:0002322 |
| Experiment Type: | Enhancer activity assay, TF binding assay, Functional perturbation assay |
| High Throughput Method: | ChIP-seq, RNA-seq, WGBS, ATAC-seq |
| Low Throughput Method: | Transgenic Reporter Assay, CRISPR Knockout, ChIP-qPCR, RT-qPCR, DNA FISH, Immunofluorescence, Confocal Imaging |
About Target Gene
| Target gene : | Sox2 |
About TF
| TF name : | Pou5F1; Nanog |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer Associated Network
Overlapping Enhancers (mm10)
7 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_02893 | chr3:34752523-34766449 | Embryo | mouse embryonic stem cell | -- |
| E_02608 | chr3:34756748-34761748 | Embryo | mouse embryonic stem cell | -- |
| E_03381 | chr3:34757100-34758037 | Embryo | mouse embryonic stem cell | -- |
| E_03382 | chr3:34757100-34758037 | Embryoid body | pluripotent stem cell | -- |
| E_03383 | chr3:34761100-34762000 | Embryo | mouse embryonic stem cell | -- |
| E_03384 | chr3:34761100-34762000 | Embryoid body | pluripotent stem cell | -- |
| E_02562 | chr3:34765000-34767361 | Embryo | mouse embryonic stem cell | -- |
Expression of Target Genes for the Enhancer