Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03053
Species: Homo sapiens
Position : chr11:47394824-47395023
Year: 2014
Title: The Runx-PU.1 pathway preserves normal and AML/ETO9a leukemic stem cells.
Genome Build: hg38
Enhancer Type: Enhancer
Condition: Disease
Disease Name: RUNX1::RUNX1T1-associated acute myeloid leukemia
PMID:  25185713
MONDO: MONDO:0018874
Tissue: bone marrow
Tissue Ontology ID: UBERON:0002371
Cell Source: AML/ETO9a leukemia stem-cell models
Cell Type: leukemia-initiating cell
Experiment Type: Endogenous TF-site enhancer perturbation
High Throughput Method: RNA-seq; hematopoietic profiling
Low Throughput Method: Runx-site mutation; transplantation; leukemia latency analysis; RT-qPCR
About Target Gene
Target gene : SPI1
About TF
TF name : RUNX1
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
RUNX1 AndrogenReceptor netpath 167
RUNX1 Organic cation transport reactome 9
RUNX1 RANKL netpath 84
RUNX1 Regulation of nuclear SMAD2/3 signaling pid 82
RUNX1 TGF_beta_Receptor netpath 220
RUNX1 Validated transcriptional targets of deltaNp63 isoforms pid 47
RUNX1 Pathways in cancer kegg 321
RUNX1 Chronic myeloid leukemia kegg 69
RUNX1 Acute myeloid leukemia kegg 53
Enhancer Associated Network
Overlapping Enhancers (hg38) 2 found
Enhancer ID Position Tissue Cell Disease
E_04645 chr11:47394824-47395023 bone marrow myeloid progenitor cell acute myeloid leukemia-associated myeloid differentiation
E_04668 chr11:47394824-47395023 bone marrow myeloid leukemia cell acute myeloid leukemia
Expression of Target Genes for the Enhancer