Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03065
Species: Homo sapiens
Position : chrX:49260470-49261090
Year: 2025
Title: Genome-wide CRISPR screen in human T cells reveals regulators of FOXP3.
Genome Build: hg38
Enhancer Type: Enhancer
Condition: Normal
PMID:  40140585
Tissue: blood
Tissue Ontology ID: UBERON:0000178
Cell Source: Primary human CD4+ T cells differentiated into iTreg cells
Cell Type: regulatory T cell
Cell Ontology ID: CL:0000815
Experiment Type: Functional perturbation assay; Enhancer epigenetic-state assay; Chromatin accessibility assay
High Throughput Method: Genome-wide CRISPR-Cas9 loss-of-function screen; Perturb-icCITE-seq; icRNA-seq; inChIP-seq; inATAC-seq; H3K9ac/H3K27ac ChIP-seq
Low Throughput Method: RBPJ CRISPR-Cas9 knockout; RBPJ overexpression; Bisulfite sequencing of FOXP3 CNS2 CpGs; FOXP3 flow cytometry; Repeated TCR/cytokine restimulation stability assay; T-cell suppression assay
About Target Gene
Target gene : FOXP3
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg38) 2 found
Enhancer ID Position Tissue Cell Disease
E_02122 chrX:49260470-49261090 blood regulatory T cell NA
E_02123 chrX:49260470-49261090 NA NA NA
Expression of Target Genes for the Enhancer