About Enhancer
| Enhancer ID: | E_03074 |
| Species: | Mus musculus |
| Position : | chr17:33930235-37702617   |
| Year: | 2023 |
| Title: | Histone demethylase KDM5D upregulation drives sex differences in colon cancer |
| Genome Build: | mm10 |
| Enhancer Type: | Enhancer |
| Condition: | Disease |
| Disease Name: | colorectal cancer |
| PMID: | 37344599 |
| MONDO: | MONDO:0005176 |
| Tissue: | Colon |
| Tissue Ontology ID: | UBERON:0001155 |
| Cell Source: | iKAP colorectal cancer cells |
| CVCL ID: | |
| Cell Type: | colorectal cancer cell |
| Cell Ontology ID: | CL:0000066 |
| Experiment Type: | Chromatin interaction, Functional perturbation |
| High Throughput Method: | HiChIP, ChIP-seq, RNA-seq |
| Low Throughput Method: | RT-RT-qPCR, Western blot, Flow cytometry, T cell killing assay |
About Target Gene
| Target gene : | Tap1 |
About TF
| TF name : |
About Regulatory State
| Regulatory State : | Silenced |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer Associated Network
Overlapping Enhancers (mm10)
15 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_02481 | chr17:34048994-34049208 | Lens | lens epithelial cell | -- |
| E_02482 | chr17:34048994-34049208 | Lens | lens fiber cell | -- |
| E_02483 | chr17:34049209-34050661 | Lens | lens epithelial cell | -- |
| E_02484 | chr17:34049209-34050661 | Lens | lens fiber cell | -- |
| E_02485 | chr17:34060350-34061356 | Lens | lens epithelial cell | -- |
| E_02486 | chr17:34060350-34061356 | Lens | lens fiber cell | -- |
| E_02430 | chr17:34210000-34250000 | Bone marrow | monocyte-dendritic cell progenitor | -- |
| E_02439 | chr17:34520000-34525000 | Lung | pulmonary artery endothelial cell | -- |
| E_02458 | chr17:34540000-34542000 | Embryo | fibroblast | -- |
| E_02557 | chr17:35500000-35501700 | Embryo | mouse embryonic fibroblast | -- |
| E_02080 | chr17:35600000-35630000 | Embryo | mouse embryonic stem cell | -- |
| E_02464 | chr17:35602100-35602600 | Embryo | mouse embryonic stem cell | -- |
| E_02866 | chr17:35605300-35605800 | Embryo | mouse embryonic stem cell | -- |
| E_03021 | chr17:35643073-35645472 | Embryo | mouse embryonic fibroblast | -- |
| E_03361 | chr17:35643473-35645472 | Embryo | embryonic stem cell | -- |
Expression of Target Genes for the Enhancer