Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03109
Species: Homo sapiens
Position : chr20:21576001-21577647
Year: 2025
Title: p300/CBP is an essential driver of pathogenic enhancer activity and gene expression in Ewing sarcoma.
Genome Build: hg38
Enhancer Type: Enhancer
Condition: Disease
Disease Name: Ewing sarcoma
PMID:  40890402
MONDO: MONDO:0012817
Tissue: orbital region
Tissue Ontology ID: UBERON:0004088
Cell Source: SK-N-MC
CVCL ID: CVCL_0530
Cell Type: malignant cell
Cell Ontology ID: CL:0001064
Experiment Type: Enhancer-associated functional perturbation assay; in vivo xenograft assay; In vivo functional validation
High Throughput Method: EWSR1::FLI1 ChIP-seq; histone-acetylation ChIP-seq; ribo-depleted RNA-seq
Low Throughput Method: A-485 treatment; dCBP-1 treatment; CCS1477 treatment; ChIP-qPCR; enhancer RNA RT-qPCR; NKX2-2 RT-qPCR; SK-N-MC xenograft tumor-growth assay; In vivo phenotyping
About Target Gene
Target gene : NKX2-2
About TF
TF name : EWSR1::FLI1
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg38) 2 found
Enhancer ID Position Tissue Cell Disease
E_03066 chr20:21576001-21577647 muscle organ Ewing sarcoma cell Ewing sarcoma
E_03111 chr20:21576001-21577647 NA Ewing sarcoma cell Ewing sarcoma
Expression of Target Genes for the Enhancer