Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03128
Species: Mus musculus
Position : chr16:13020425-13021045
Year: 2011
Title: The pancreatic islet ?|??-cell-enriched transcription factor Pdx-1 regulates Slc30a8 gene transcription through an intronic enhancer
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Disease
Disease Name: cervical cancer
PMID:  20942803
MONDO: MONDO:0001156
Tissue: Cervix
Tissue Ontology ID: UBERON:0000002
Cell Source: HeLa
CVCL ID: CVCL_0030
Cell Type: cervical adenocarcinoma cell
Cell Ontology ID: CL:0000069
Experiment Type: Enhancer activity assay, TF binding assay
High Throughput Method:
Low Throughput Method: Luciferase Reporter Assay, EMSA, ChIP-RT-qPCR, RT-RT-qPCR, Western blot
About Target Gene
Target gene : Slc30A8
About TF
TF name : Pdx-1
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (mm10) 3 found
Enhancer ID Position Tissue Cell Disease
E_03126 chr16:13020425-13021045 Pancreatic islet pancreatic beta cell --
E_03127 chr16:13020425-13021045 Pancreatic islet pancreatic beta cell --
E_03211 chr16:13020625-13020824 Pancreatic islet pancreatic beta cell --
Expression of Target Genes for the Enhancer